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Ivan Mazoni
Ivan Mazoni
Analista, Embrapa Informática Agropecuária
Verified email at embrapa.br
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Year
Predicting enzyme class from protein structure using Bayesian classification.
LC Borro, SRM Oliveira, MEB Yamagishi, AL Mancini, JG Jardine, ...
Genetics and Molecular Research, v. 5, n. 1, p. 193-202, 2006., 2006
662006
The Star STING server: a multiplatform environment for protein structure analysis.
G Neshich, I Mazoni, SRM Oliveira, MEB Yamagishi, PR Kuser-Falcao, ...
Genetics and Molecular Research, v. 5, n. 4, p. 717-722, 2006., 2006
312006
Improving predictions of protein-protein interfaces by combining amino acid-specific classifiers based on structural and physicochemical descriptors with their weighted …
FR de Moraes, IAP Neshich, I Mazoni, IH Yano, JGC Pereira, JA Salim, ...
Plos one 9 (1), e87107, 2014
122014
Analysis of binding properties and specificity through identification of the interface forming residues (IFR) for serine proteases in silico docked to different inhibitors
C Ribeiro, RC Togawa, IAP Neshich, I Mazoni, AL Mancini, RCM Minardi, ...
BMC Structural Biology 10, 1-16, 2010
102010
Computational biology tools for identifying specific ligand binding residues for novel agrochemical and drug design
I Agostinho Pena Neshich, L Nishimura, F Rogerio de Moraes, ...
Current Protein and Peptide Science 16 (8), 701-717, 2015
92015
Using Structural and Physical–Chemical Parameters to Identify, Classify, and Predict Functional Districts in Proteins—The Role of Electrostatic Potential
G Neshich, IA Pena Neshich, F Moraes, JA Salim, L Borro, IH Yano, ...
Computational Electrostatics for Biological Applications: Geometric and …, 2015
62015
PDB-Metrics: a web tool for exploring the PDB contents.
R Fileto, PR Kuser, MEB Yamagishi, AA Ribeiro, TG Quinalia, EH Franco, ...
Genetics and Molecular Research, v. 5, n. 2, p. 333-341, 2006., 2006
52006
Building multiple sequence alignments with a flavor of HSSP alignments.
RH Higa, SAB da Cruz, PR Kuser, MEB Yamagishi, R Fileto, ...
Genetics and Molecular Research, v. 5, n. 1, p. 127-137, 2006., 2006
42006
Study of specific nanoenvironments containing α-helices in all-α and (α+ β)+(α/β) proteins
I Mazoni, LC Borro, JG Jardine, IH Yano, JA Salim, G Neshich
PloS one 13 (7), e0200018, 2018
32018
Biologia computacional molecular e suas aplicações na agricultura.
JG Jardine, IAP Neshich, I Mazoni, IH Yano, FR de Moraes, JA Salim, ...
In: MASSRUHÁ, SMFS; LEITE, MA de A.; LUCHIARI JUNIOR, A.; ROMANI, LAS (Ed …, 2014
32014
Mechanisms of protein stabilization at very low pH
F Duarte, R Sepulveda, R Araya, S Flores, T Perez-Acle, W Gonzales, ...
Proc. 19th International Biohydrometallurgy Symposium, Changsha, China, 349-353, 2011
32011
A comparison between internal protein nanoenvironments of α-helices and β-sheets
I Mazoni, JA Salim, FR de Moraes, L Borro, G Neshich
Plos one 15 (12), e0244315, 2020
22020
Binding affinity prediction using a nonparametric regression model based on physicochemical and structural descriptors of the nano-environment for protein-ligand interactions.
L Borro, IH YANO, I Mazoni, G Neshich
In: STRUCTURAL BIOINFORMATICS AND COMPUTATIONAL BIOPHYSICS, 2016, Orlando …, 2016
22016
Identificando Pockets na superfície protéica usando o Java Protein Dossier-JPD.
MEB Yamagishi, PRK Falcão, RH Higa, EH dos Santos, JG Jardine, ...
Campinas: Embrapa Informática Agropecuária, 2005., 2005
22005
Análise do nano-ambiente propício para nucleação e manutenção dos elementos da estrutura secundária no contexto estrutural das proteínas funcionais
I Mazoni
PhD Thesis. Campinas: UNICAMP, Instituto de Biologia, 2018
12018
Uma metodologia para seleção de parâmetros em modelos de classificação de proteínas.
SRM OLIVEIRA, MEB Yamagishi, LC Borro, PRK Falcão, ...
Campinas: Embrapa Informática Agropecuária, 2006., 2006
12006
Comprehensive analysis of the distinct nano environments characteristics containing the different secondary structure elements: α-helices, β-sheets, and turns
I Mazoni, JA Salim, FR Moraes, JL Correa, L Borro, G Neshich
2023
DIPN: a dictionary of the internal proteins nanoenvironments and their potential for transformation into agricultural assets.
I Mazoni, G Neshich
In: MASSRUHÁ, SMFS; LEITE, MA de A.; OLIVEIRA, SR de M.; MEIRA, CAA …, 2023
2023
Interactions between tanshinones and derivatives with PAI-1, a possible new class of anticoagulants.
RV dos SANTOS, I MAZONI, L TASIC
In: REUNIÃO ANUAL DA SBQ, 45., 2022, Maceió. Química para o desenvolvimento …, 2022
2022
DPIN: um dicionário dos nanoambientes internos das proteínas e seu potencial para transformação em ativos para a agricultura.
I MAZONI, G NESHICH
In: MASSRUHÁ, SMFS; LEITE, MA de A.; OLIVEIRA, SR de M.; MEIRA, CAA …, 2020
2020
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