Ivan Mazoni
Ivan Mazoni
Analista, Embrapa Informática Agropecuária
Verified email at embrapa.br
Title
Cited by
Cited by
Year
Predicting enzyme class from protein structure using Bayesian classification.
LC Borro, SRM Oliveira, MEB Yamagishi, AL Mancini, JG Jardine, ...
Embrapa Informática Agropecuária-Artigo em periódico indexado (ALICE), 2006
552006
The Star STING server: a multiplatform environment for protein structure analysis.
G Neshich, I Mazoni, SRM Oliveira, MEB Yamagishi, PR Kuser-Falcao, ...
Embrapa Informática Agropecuária-Artigo em periódico indexado (ALICE), 2006
302006
Analysis of binding properties and specificity through identification of the interface forming residues (IFR) for serine proteases in silico docked to different inhibitors
C Ribeiro, RC Togawa, IAP Neshich, I Mazoni, AL Mancini, ...
BMC Structural Biology 10 (1), 36, 2010
112010
Improving predictions of protein-protein interfaces by combining amino acid-specific classifiers based on structural and physicochemical descriptors with their weighted …
FR de Moraes, IAP Neshich, I Mazoni, IH Yano, JGC Pereira, JA Salim, ...
PloS one 9 (1), e87107, 2014
102014
Computational biology tools for identifying specific ligand binding residues for novel agrochemical and drug design
I Agostinho Pena Neshich, L Nishimura, F Rogerio de Moraes, ...
Current Protein and Peptide Science 16 (8), 701-717, 2015
62015
PDB-Metrics: a web tool for exploring the PDB contents.
R Fileto, PR Kuser, MEB Yamagishi, AA Ribeiro, TG Quinalia, EH Franco, ...
Embrapa Informática Agropecuária-Artigo em periódico indexado (ALICE), 2006
52006
Using Structural and Physical–Chemical Parameters to Identify, Classify, and Predict Functional Districts in Proteins—The Role of Electrostatic Potential
G Neshich, IAP Neshich, F Moraes, JA Salim, L Borro, IH Yano, I Mazoni, ...
Computational Electrostatics for Biological Applications, 227-254, 2015
42015
Building multiple sequence alignments with a flavor of HSSP alignments.
RH Higa, SAB da Cruz, PR Kuser, MEB Yamagishi, R Fileto, ...
Embrapa Informática Agropecuária-Artigo em periódico indexado (ALICE), 2006
42006
Identificando Pockets na superfície protéica usando o Java Protein Dossier-JPD.
MEB Yamagishi, PRK Falcão, RH Higa, EH dos Santos, JG Jardine, ...
Embrapa Informática Agropecuária. Comunicado Técnico, 2005
22005
Biologia computacional molecular e suas aplicações na agricultura.
JG Jardine, IAP Neshich, I Mazoni, IH Yano, FR de Moraes, JA Salim, ...
Embrapa Informática Agropecuária-Capítulo em livro científico (ALICE), 2014
12014
Uma metodologia para seleção de parâmetros em modelos de classificação de proteínas.
SRM OLIVEIRA, MEB Yamagishi, LC Borro, PRK Falcão, ...
Embrapa Informática Agropecuária-Boletim de Pesquisa e Desenvolvimento …, 2006
12006
Identification of therapeutic targets for computer-based design of drugs against bacteria containing the PilT protein
G Neshich, IAP Neshich, JG Jardine, L Nishimura, I Mazoni, J Salim
US Patent 10,460,827, 2019
2019
Study of specific nanoenvironments containing α-helices in all-α and (α+ β)+(α/β) proteins
I Mazoni, LC Borro, JG Jardine, IH Yano, JA Salim, G Neshich
PloS one 13 (7), e0200018, 2018
2018
Análise do nano-ambiente propício para nucleação e manutenção dos elementos da estrutura secundária no contexto estrutural das proteínas funcionais
I Mazoni
[sn], 2018
2018
Study of specific nanoenvironments containing [alfa]-helices in all-[alfa] and ([alfa]+[beta])+([alfa]/[beta]) proteins.
I Mazoni, LC Borro, JG Jardine, IH Yano, JA Salim, G Neshich
Embrapa Informática Agropecuária-Artigo em periódico indexado (ALICE), 2018
2018
Multiple structure single parameter: analysis of a single protein nano environment descriptor characterizing a shared loci on structurally aligned proteins
JA Salim, L Borro, I Mazoni, I Yano, JG Jardine, G Neshich
Bioinformatics 32 (12), 1885-1887, 2016
2016
Binding affinity prediction using a nonparametric regression model based on physicochemical and structural descriptors of the nano-environment for protein-ligand interactions.
L Borro, IH YANO, I Mazoni, G Neshich
Embrapa Informática Agropecuária-Resumo em anais de congresso (ALICE), 2016
2016
Improving binding affinity prediction by using a rule-based model with physical-chemical and structural descriptors of the nano-environment for protein-ligand interactions.
LC BORRO, JA SALIM, I MAZONI, I YANO, JG JARDINE, G NESHICH
Embrapa Informática Agropecuária-Resumo em anais de congresso (ALICE), 2015
2015
Pathogenic prion proteins (PrP) have higher electrostatic potential pattern than normal cellular prion protein in a specific region
IAP Neshich, I Mazoni, JA Salim, FR Moraes, L Nishimura, JG Jardine, ...
2011
Signature contact coordination patterns for secondary structure elements in protein structures.
JG Jardine, I Mazoni, LC Borro, D Alvarenga, G Neshich
Embrapa Informática Agropecuária-Resumo em anais de congresso (ALICE), 2008
2008
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Articles 1–20