|A unifying model for the selective regulation of inducible transcription by CpG islands and nucleosome remodeling|
VR Ramirez-Carrozzi, D Braas, DM Bhatt, CS Cheng, C Hong, KR Doty, ...
Cell 138 (1), 114-128, 2009
|Histone methylation-dependent mechanisms impose ligand dependency for gene activation by nuclear receptors|
I Garcia-Bassets, YS Kwon, F Telese, GG Prefontaine, KR Hutt, CS Cheng, ...
Cell 128 (3), 505-518, 2007
|A high-throughput chromatin immunoprecipitation approach reveals principles of dynamic gene regulation in mammals|
M Garber, N Yosef, A Goren, R Raychowdhury, A Thielke, M Guttman, ...
Molecular cell 47 (5), 810-822, 2012
|High-resolution interrogation of functional elements in the noncoding genome|
NE Sanjana, J Wright, K Zheng, O Shalem, P Fontanillas, J Joung, ...
Science 353 (6307), 1545-1549, 2016
|Sensitive ChIP-DSL technology reveals an extensive estrogen receptor α-binding program on human gene promoters|
YS Kwon, I Garcia-Bassets, KR Hutt, CS Cheng, M Jin, D Liu, C Benner, ...
Proceedings of the National Academy of Sciences 104 (12), 4852-4857, 2007
|Mechanisms establishing TLR4-responsive activation states of inflammatory response genes|
L Escoubet-Lozach, C Benner, MU Kaikkonen, J Lozach, S Heinz, ...
PLoS genetics 7 (12), e1002401, 2011
|The specificity of innate immune responses is enforced by repression of interferon response elements by NF-κB p50|
CS Cheng, KE Feldman, J Lee, S Verma, DB Huang, K Huynh, M Chang, ...
Sci. Signal. 4 (161), ra11-ra11, 2011
|Genetic determinants of co-accessible chromatin regions in activated T cells across humans|
RE Gate, CS Cheng, AP Aiden, A Siba, M Tabaka, D Lituiev, I Machol, ...
Nature genetics 50 (8), 1140, 2018
|Systematic epigenomic analysis reveals chromatin states associated with melanoma progression|
P Fiziev, KC Akdemir, JP Miller, EZ Keung, NS Samant, S Sharma, ...
Cell reports 19 (4), 875-889, 2017
|PHF6 regulates phenotypic plasticity through chromatin organization within lineage-specific genes|
YM Soto-Feliciano, JME Bartlebaugh, Y Liu, FJ Sánchez-Rivera, ...
Genes & development, 2017
|Iterative modeling reveals evidence of sequential transcriptional control mechanisms|
CS Cheng, MS Behar, GW Suryawanshi, KE Feldman, R Spreafico, ...
Cell systems 4 (3), 330-343. e5, 2017
|Genome-scale identification of transcription factors that mediate an inflammatory network during breast cellular transformation|
Z Ji, L He, A Rotem, A Janzer, CS Cheng, A Regev, K Struhl
Nature communications 9 (1), 2068, 2018
|Semiconductor-based DNA sequencing of histone modification states|
CS Cheng, K Rai, M Garber, A Hollinger, D Robbins, S Anderson, ...
Nature communications 4, ncomms3672, 2013
|Epigenetic control: slow and global, nimble and local|
CS Cheng, TL Johnson, A Hoffmann
Genes & development 22 (9), 1110-1114, 2008