Comprehensive in vivo interrogation reveals phenotypic impact of human enhancer variants EZ Kvon, Y Zhu, G Kelman, CS Novak, I Plajzer-Frick, M Kato, TH Garvin, ... Cell 180 (6), 1262-1271. e15, 2020 | 116 | 2020 |
Census of solo LuxR genes in prokaryotic genomes S Hudaiberdiev, KS Choudhary, R Vera Alvarez, Z Gelencsér, B Ligeti, ... Frontiers in cellular and infection microbiology 5, 20, 2015 | 96 | 2015 |
Phylogenomics of Cas4 family nucleases S Hudaiberdiev, S Shmakov, YI Wolf, MP Terns, KS Makarova, EV Koonin BMC evolutionary biology 17, 1-14, 2017 | 69 | 2017 |
ComQXPA quorum sensing systems may not be unique to Bacillus subtilis: a census in prokaryotic genomes I Dogsa, KS Choudhary, Z Marsetic, S Hudaiberdiev, R Vera, S Pongor, ... PloS one 9 (5), e96122, 2014 | 51 | 2014 |
The Organization of the Quorum Sensing luxI/R Family Genes in Burkholderia KS Choudhary, S Hudaiberdiev, Z Gelencsér, BG Coutinho, V Venturi, ... International journal of molecular sciences 14 (7), 13727-13747, 2013 | 42 | 2013 |
Classifying the topology of AHL-driven quorum sensing circuits in proteobacterial genomes Z Gelencsér, KS Choudhary, BG Coutinho, S Hudaiberdiev, B Galbáts, ... Sensors 12 (5), 5432-5444, 2012 | 42 | 2012 |
Chromosomal arrangement of AHL-driven quorum sensing circuits in Pseudomonas Z Gelencsér, B Galbáts, JF Gonzalez, KS Choudhary, S Hudaiberdiev, ... International Scholarly Research Notices 2012, 2012 | 18 | 2012 |
Modeling islet enhancers using deep learning identifies candidate causal variants at loci associated with T2D and glycemic traits S Hudaiberdiev, DL Taylor, W Song, N Narisu, RM Bhuiyan, HJ Taylor, ... Proceedings of the National Academy of Sciences 120 (35), e2206612120, 2023 | 1 | 2023 |
Sequence characteristics and an accurate model of high-occupancy target loci in the human genome. S Hudaiberdiev, I Ovcharenko Biorxiv: the Preprint Server for Biology, 2023 | 1 | 2023 |
Computational analysis of quorum sensing systems in bacterial genomes: developing automated annotiation tools S Hudaiberdiev Univerza v Novi Gorici, Fakulteta za podiplomski študij, 2014 | 1 | 2014 |
ChromDL: a next-generation regulatory DNA classifier C Hill, S Hudaiberdiev, I Ovcharenko Bioinformatics 39 (Supplement_1), i377-i385, 2023 | | 2023 |
Sequence characteristics and an accurate model of abundant hyperactive loci in the human genome S Hudaiberdiev, I Ovcharenko bioRxiv, 2023 | | 2023 |
The Organization of the Quorum Sensing luxI/R Family Genes in Burkholderia S Pongor, V Venturi, BG Coutinho, Z Gelencsér, KS Choudhary, ... | | 2013 |
Chromosomal Arrangement of AHL-Driven Quorum Sensing Circuits in Pseudomonas S Hudaiberdiev, V Venturi, S ándor Pongor | | 2012 |
Computational Biology Branch, National Library of Medicine, National Institutes of Health, Bethesda, MD, 20892, USA. to whom correspondence should be addressed: ovcharen@ nih … S Hudaiberdiev, I Ovcharenko | | |
Classifying the Topology of AHL-Driven Quorum Sensing Circuits in Proteobacterial Genomes. Sensors 2012, 12 Z Gelencsér, KS Choudhary, BG Coutinho, S Hudaiberdiev, B Galbáts, ... | | |