| Evidence for human microRNA-offset RNAs in small RNA sequencing data D Langenberger, C Bermudez-Santana, J Hertel, S Hoffmann, ... Bioinformatics 25 (18), 2298-2301, 2009 | 156 | 2009 |
| Genomic organization of eukaryotic tRNAs C Bermudez-Santana, CSO Attolini, T Kirsten, J Engelhardt, SJ Prohaska, ... BMC genomics 11, 1-14, 2010 | 98 | 2010 |
| Identification and classification of small RNAs in transcriptome sequence data D Langenberger, CI Bermudez-Santana, PF Stadler, S Hoffmann Biocomputing 2010, 80-87, 2010 | 81 | 2010 |
| Comprehensive genomic resources related to domestication and crop improvement traits in Lima bean T Garcia, J Duitama, SS Zullo, J Gil, A Ariani, S Dohle, A Palkovic, ... Nature Communications 12 (1), 702, 2021 | 52 | 2021 |
| Evolutionary genomics of microRNAs and their relatives A Tanzer, M Riester, J Hertel, CI Bermudez-Santana, J Gorodkin, ... Evolutionary genomics and systems biology, 295-327, 2010 | 28 | 2010 |
| Orthologs, turn-over, and remolding of tRNAs in primates and fruit flies CA Velandia-Huerto, SJ Berkemer, A Hoffmann, N Retzlaff, ... BMC genomics 17, 1-15, 2016 | 21 | 2016 |
| Automated detection of ncRNAs in the draft genome sequence of a colonial tunicate: the carpet sea squirt Didemnum vexillum CA Velandia-Huerto, AA Gittenberger, FD Brown, PF Stadler, ... BMC genomics 17, 1-15, 2016 | 19 | 2016 |
| Dengue virus potentially promotes migratory responses on endothelial cells by enhancing pro-migratory soluble factors and miRNAs DA Álvarez-Díaz, AA Gutiérrez-Díaz, E Orozco-García, A Puerta-González, ... Virus research 259, 68-76, 2019 | 13 | 2019 |
| Nonprotein-coding RNAs as regulators of development in tunicates CA Velandia-Huerto, FD Brown, A Gittenberger, PF Stadler, ... Marine Organisms as Model Systems in Biology and Medicine, 197-225, 2018 | 7 | 2018 |
| Evolutionary genomics and systems biology A Tanzer, M Riester, J Hertel, CI Bermudez-Santana, J Gorodkin, ... Wiley-Blackwell, Hoboken (NJ, 2010 | 7 | 2010 |
| Introducing evolutionary biologists to the analysis of big data: guidelines to organize extended bioinformatics training courses R Faria, D Triant, A Perdomo-Sabogal, B Overduin, C Bleidorn, ... Evolution: Education and Outreach 11 (1), 1-10, 2018 | 4 | 2018 |
| Next-generation sequencing of postmortem molecular markers to support for medicolegal autopsy JA Ariza, AHM Rocha, RC Pérez, CI Bermudez-Santana Forensic Science International: Reports 6, 100300, 2022 | 3 | 2022 |
| RNA structure-altering mutations underlying positive selection on Spike protein reveal novel putative signatures to trace crossing host-species barriers in Betacoronavirus AF Rojas-Cruz, JC Gallego-Gómez, CI Bermúdez-Santana RNA biology 19 (1), 1019-1044, 2022 | 2 | 2022 |
| The Genome of the “Sea Vomit” Didemnum vexillum E Parra-Rincón, CA Velandia-Huerto, A Gittenberger, J Fallmann, T Gatter, ... Life 11 (12), 1377, 2021 | 2 | 2021 |
| Aplicaciones de la bioinformática en la medicina: el genoma humano.¿ Cómo podemos ver tanto detalle? CI Bermudez-Santana Acta Biológica Colombiana 21 (1Supl), 249-258, 2016 | 2 | 2016 |
| Buscando agujas en un pajar: viajes de RNAs pequenos in silico e in vitro CI Bermudez Santana Acta Biológica Colombiana 16 (3), 103-114, 2011 | 2 | 2011 |
| Toward a taxonomy of virus-NcRNAs Interactions in an RNA world for disentangling some tiny secrets of dengue virus CI Bermudez-Santana, JC Gallego-Gómez Preprints, 2021 | 1 | 2021 |
| Evaluation of conserved RNA secondary structures within and between geographic lineages of Zika virus K Nicolas Calderon, J Fabian Galindo, CI Bermudez-Santana Life 11 (4), 344, 2021 | 1 | 2021 |
| Systematic computational hunting for small RNAs derived from ncRNAs during dengue virus infection in endothelial HMEC-1 cells A Gutierrez-Diaz, S Hoffmann, JC Gallego-Gómez, CI Bermudez-Santana Frontiers in Bioinformatics 4, 2024 | | 2024 |
| Computational Prediction of RNA–RNA Interactions between Small RNA Tracks from Betacoronavirus Nonstructural Protein 3 and Neurotrophin Genes during … AF Rojas-Cruz, CI Bermúdez-Santana Viruses 15 (8), 1647, 2023 | | 2023 |
