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Lei Shang
Lei Shang
Senior Manager, Bioinformatics
Verified email at pfizer.com
Title
Cited by
Cited by
Year
Whole-genome sequencing is more powerful than whole-exome sequencing for detecting exome variants
A Belkadi, A Bolze, Y Itan, A Cobat, QB Vincent, A Antipenko, L Shang, ...
Proceedings of the National Academy of Sciences 112 (17), 5473-5478, 2015
6832015
Characterization of Greater Middle Eastern genetic variation for enhanced disease gene discovery
EM Scott, A Halees, Y Itan, EG Spencer, Y He, MA Azab, SB Gabriel, ...
Nature genetics 48 (9), 1071-1076, 2016
3452016
The mutation significance cutoff: gene-level thresholds for variant predictions
Y Itan, L Shang, B Boisson, MJ Ciancanelli, JG Markle, ...
Nature methods 13 (2), 109-110, 2016
2932016
Genetic diagnosis using whole exome sequencing in common variable immunodeficiency
P Maffucci, CA Filion, B Boisson, Y Itan, L Shang, JL Casanova, ...
Frontiers in immunology 7, 203536, 2016
2592016
The human gene damage index as a gene-level approach to prioritizing exome variants
Y Itan, L Shang, B Boisson, E Patin, A Bolze, M Moncada-Vélez, E Scott, ...
Proceedings of the National Academy of Sciences 112 (44), 13615-13620, 2015
2432015
Whole-exome sequencing to analyze population structure, parental inbreeding, and familial linkage
A Belkadi, V Pedergnana, A Cobat, Y Itan, QB Vincent, A Abhyankar, ...
Proceedings of the National Academy of Sciences 113 (24), 6713-6718, 2016
682016
Blacklisting variants common in private cohorts but not in public databases optimizes human exome analysis
P Maffucci, B Bigio, F Rapaport, A Cobat, A Borghesi, M Lopez, E Patin, ...
Proceedings of the National Academy of Sciences 116 (3), 950-959, 2019
632019
Capturing the biology of disease severity in a PSC-based model of familial dysautonomia
N Zeltner, F Fattahi, NC Dubois, N Saurat, F Lafaille, L Shang, B Zimmer, ...
Nature medicine 22 (12), 1421-1427, 2016
632016
Chronic mucocutaneous candidiasis and connective tissue disorder in humans with impaired JNK1-dependent responses to IL-17A/F and TGF-β
J Li, M Ritelli, CS Ma, G Rao, T Habib, E Corvilain, S Bougarn, S Cypowyj, ...
Science immunology 4 (41), eaax7965, 2019
432019
Structural constraints identified with covariation analysis in ribosomal RNA
L Shang, W Xu, S Ozer, RR Gutell
PLoS One 7 (6), e39383, 2012
342012
Analysis of phage Mu DNA transposition by whole-genome Escherichia coli tiling arrays reveals a complex relationship to distribution of target selection protein B …
J Ge, Z Lou, H Cui, L Shang, RM Harshey
Journal of biosciences 36, 587-601, 2011
182011
Molecular evolution and multilocus sequence typing of 145 strains of SARS-CoV
ZG Wang, ZH Zheng, L Shang, LJ Li, LM Cong, MG Feng, Y Luo, ...
FEBS letters 579 (22), 4928-4936, 2005
172005
Two accurate sequence, structure, and phylogenetic template-based RNA alignment systems
L Shang, DP Gardner, W Xu, JJ Cannone, DP Miranker, S Ozer, RR Gutell
BMC Systems Biology 7, 1-15, 2013
112013
RNA2DMap: A Visual Exploration Tool of the Information in RNA's Higher-Order Structure
W Xu, A Wongsa, J Lee, L Shang, JJ Cannone, RR Gutell
2011 IEEE International Conference on Bioinformatics and Biomedicine, 613-617, 2011
92011
CDG: an online server for detecting biologically closest disease-causing genes and its application to primary immunodeficiency
D Requena, P Maffucci, B Bigio, L Shang, A Abhyankar, B Boisson, ...
Frontiers in Immunology 9, 1340, 2018
82018
Polymorphism of SARS-CoV genomes
L Shang, QI Yan, BAO Qi-Yu, T Wei, XU Jian-Cheng, F Ming-Guang, ...
Acta Genetica Sinica 33 (4), 354-364, 2006
42006
CDG: an online server proposing biologically closest disease-causing genes and pathologies and its application to primary immunodeficiency
D Requena, P Maffucci, B Bigio, L Shang, A Abhyankar, B Boisson, ...
Frontiers in Immunology 9, 2018
2018
ELIMINATING NON-PATHOGENIC VARIATIONS FROM HUMAN EXOMES USING BLACKLISTS
P Maffucci, Y Itan, B Boisson, L Shang, B Bigio, A Cobat, JL Casanova, ...
JOURNAL OF CLINICAL IMMUNOLOGY 37 (2), 229-230, 2017
2017
FINDING A NEEDLE IN A HAYSTACK: NEW APPROACHES TO IDENTIFY DISEASE-CAUSING MUTATIONS IN PATIENTS'HIGH-THROUGHPUT SEQUENCING DATA
Y Itan, L Shang, SY Zhang, B Boisson, L Abel, JL Casanova
JOURNAL OF CLINICAL IMMUNOLOGY 36 (3), 238-239, 2016
2016
Characterization of Greater Middle Eastern genetic variation for enhanced disease gene discovery
Nature Genetics 48, 1071-1076, 2016
2016
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