|Enrichr: a comprehensive gene set enrichment analysis web server 2016 update|
MV Kuleshov, MR Jones, AD Rouillard, NF Fernandez, Q Duan, Z Wang, ...
Nucleic acids research 44 (W1), W90-W97, 2016
|Formation of regulatory patterns during signal propagation in a mammalian cellular network|
A Ma'ayan, SL Jenkins, S Neves, A Hasseldine, E Grace, B Dubin-Thaler, ...
Science 309 (5737), 1078, 2005
|Network analysis of FDA approved drugs and their targets|
A Ma'ayan, SL Jenkins, J Goldfarb, R Iyengar
Mount Sinai Journal of Medicine: A Journal of Translational and Personalized …, 2007
|The library of integrated network-based cellular signatures NIH program: system-level cataloging of human cells response to perturbations|
AB Keenan, SL Jenkins, KM Jagodnik, S Koplev, E He, D Torre, Z Wang, ...
Cell systems 6 (1), 13-24, 2018
|Extraction and analysis of signatures from the Gene Expression Omnibus by the crowd|
Z Wang, CD Monteiro, KM Jagodnik, NF Fernandez, GW Gundersen, ...
Nature communications 7, 12846, 2016
|Systems approach to explore components and interactions in the presynapse|
NS Abul‐Husn, I Bushlin, JA Morón, SL Jenkins, G Dolios, R Wang, ...
Proteomics 9 (12), 3303-3315, 2009
|Data Portal for the Library of Integrated Network-based Cellular Signatures (LINCS) program: integrated access to diverse large-scale cellular perturbation response data|
A Koleti, R Terryn, V Stathias, C Chung, DJ Cooper, JP Turner, D Vidović, ...
Nucleic acids research 46 (D1), D558-D566, 2017
|Systems Biology--Biomedical Modeling|
EA Sobie, YS Lee, SL Jenkins, R Iyengar
Science Signaling 4 (190), tr2, 2011
|Neuro2A differentiation by Gαi/o pathway|
A Ma'ayan, SL Jenkins, A Barash, R Iyengar
Science signaling 2 (54), cm1-cm1, 2009
|SNAVI: Desktop application for analysis and visualization of large-scale signaling networks|
A Ma'ayan, SL Jenkins, RL Webb, SI Berger, SP Purushothaman, ...
BMC Systems Biology 3 (1), 10, 2009
|Genes2WordCloud: a quick way to identify biological themes from gene lists and free text|
C Baroukh, SL Jenkins, R Dannenfelser, A Ma'ayan
Source code for biology and medicine 6 (1), 15, 2011
|Systems pharmacology meets predictive, preventive, personalized and participatory medicine|
SL Jenkins, A Ma’ayan
Pharmacogenomics 14 (2), 119-122, 2013
|Inquiry learning. Integrating content detail and critical reasoning by peer review|
R Iyengar, MA Diverse-Pierluissi, SL Jenkins, AM Chan, LA Devi, ...
Science 319 (5867), 1189, 2008
|Developing a framework for digital objects in the Big Data to Knowledge (BD2K) commons: Report from the Commons Framework Pilots workshop|
KM Jagodnik, S Koplev, SL Jenkins, L Ohno-Machado, B Paten, ...
Journal of biomedical informatics 71, 49-57, 2017
|Training in systems pharmacology: predoctoral program in pharmacology and systems biology at Mount Sinai School of Medicine|
EA Sobie, SL Jenkins, R Iyengar, TA Krulwich
Clinical Pharmacology & Therapeutics 88 (1), 19-22, 2010
|FAIRshake: toolkit to evaluate the findability, accessibility, interoperability, and reusability of research digital resources|
DJB Clark, L Wang, A Jones, ML Wojciechowicz, D Torre, KM Jagodnik, ...
BioRxiv, 657676, 2019
|Using Web-based discussion forums as a model of the peer-review process and a tool for assessment|
SL Jenkins, R Iyengar, MA Diverse-Pierluissi, AM Chan, LA Devi, ...
Sci. Signal. 1 (9), tr2-tr2, 2008
|Connectivity Mapping: Methods and Applications|
AB Keenan, ML Wojciechowicz, Z Wang, KM Jagodnik, SL Jenkins, ...
Annual Review of Biomedical Data Science 2, 69-92, 2019
|FAIRshake: Toolkit to Evaluate the FAIRness of Research Digital Resources|
DJB Clarke, L Wang, A Jones, ML Wojciechowicz, D Torre, KM Jagodnik, ...
Cell systems, 2019
|Community training and outreach activities of the BD2K-LINCS data coordination and integration center (DCIC)|
S Jenkins, S Schürer, M Medvedovic, A Ma'ayan
F1000Research 5, 2016