Yuri Pirola

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Paola BonizzoniUniversity of Milano BicoccaVerified email at unimib.it
Gianluca Della VedovaUniversità degli Studi di Milano-BicoccaVerified email at dellavedova.org
Raffaella RizziRicercatore confermato in Informatica, Università degli Studi di Milano-BicoccaVerified email at disco.unimib.it
Riccardo DondiUniversità degli studi di BergamoVerified email at unibg.it
Marco PrevitaliPostDoc, Università degli studi di Milano-BicoccaVerified email at unimib.it
Stefano BerettaSan Raffaele Telethon Institute for Gene TherapyVerified email at hsr.it
Gunnar W. KlauHeinrich Heine University DüsseldorfVerified email at hhu.de
Nadia PisantiUniversity of Pisa & Erable Team INRIAVerified email at di.unipi.it
Simone ZaccariaPrincipal Research Fellow, University College London, Cancer InstituteVerified email at ucl.ac.uk
Giancarlo MauriProfessor of Computer Science - University of Milano-BicoccaVerified email at disco.unimib.it
Leonardo VanneschiNOVA IMS, Universidade Nova de LisboaVerified email at isegi.unl.pt
Philippe CollardFull Professor, Université Nice Sophia AntipolisVerified email at unice.fr
Graziano PesoleProfessor of Molecular Biology, Università degli Studi di Bari and National Research CouncilVerified email at uniba.it
Picardi ErnestoAssociate Professor of Molecular BiologyVerified email at uniba.it
Ferdinando ChiaradonnaUniversity of Milano Bicocca, Biotechnology and Biosciences DepartmentVerified email at unimib.it
Sébastien VerelProfessor of Computer Science, Laboratoire LISIC, Université du Littoral Côte d'Opale, FranceVerified email at univ-littoral.fr
Marco TomassiniProfessor of Computer Science, Faculty of Business and Economics (HEC), University of LausanneVerified email at unil.ch
Tao JiangUC RiversideVerified email at cs.ucr.edu
Cristina AiroldiUniversity of Milano-Bicocca, Milan, ItalyVerified email at unimib.it
Karsten HillerUniversity of BraunschweigVerified email at tu-braunschweig.de

Yuri Pirola

Assistant professor at DISCo, Univ. of Milano-Bicocca

Verified email at unimib.it - Homepage

Algorithms Computer Science Bioinformatics Computational Biology


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Protein Kinase A Activation Promotes Cancer Cell Resistance to Glucose Starvation and Anoikis R Palorini, G Votta, Y Pirola, H De Vitto, S De Palma, C Airoldi, M Vasso, ... PLoS genetics 12 (3), e1005931, 2016	54	2016
HapCol: accurate and memory-efficient haplotype assembly from long reads Y Pirola, S Zaccaria, R Dondi, GW Klau, N Pisanti, P Bonizzoni Bioinformatics 32 (11), 1610-1617, 2016	42	2016
Variants of constrained longest common subsequence P Bonizzoni, G Della Vedova, R Dondi, Y Pirola Information processing letters 110 (20), 877-881, 2010	38	2010
A comprehensive view of fitness landscapes with neutrality and fitness clouds L Vanneschi, M Tomassini, P Collard, S Vérel, Y Pirola, G Mauri European Conference on Genetic Programming, 241-250, 2007	32	2007
On the Minimum Error Correction Problem for Haplotype Assembly in Diploid and Polyploid Genomes P Bonizzoni, R Dondi, GW Klau, Y Pirola, N Pisanti, S Zaccaria Journal of Computational Biology, 2016	24	2016
Detecting alternative gene structures from spliced ESTs: a computational approach P Bonizzoni, G Mauri, G Pesole, E Picardi, Y Pirola, R Rizzi Journal of computational biology 16 (1), 43-66, 2009	22	2009
A quantitative study of neutrality in GP boolean landscapes L Vanneschi, Y Pirola, P Collard Proceedings of the 8th annual conference on Genetic and evolutionary …, 2006	20	2006
Modeling Alternative Splicing Variants from RNA-Seq Data with Isoform Graphs S Beretta, P Bonizzoni, G Della Vedova, Y Pirola, R Rizzi Journal of Computational Biology 16 (1), 16-40, 2013	19	2013
LSG: An External-Memory Tool to Compute String Graphs for Next-Generation Sequencing Data Assembly P Bonizzoni, GD Vedova, Y Pirola, M Previtali, R Rizzi Journal of Computational Biology 23 (3), 137-149, 2016	18	2016
FSG: Fast String Graph Construction for De Novo Assembly P Bonizzoni, GD Vedova, Y Pirola, M Previtali, R Rizzi Journal of Computational Biology 24 (10), 953-968, 2017	15	2017
Covering pairs in directed acyclic graphs N Beerenwinkel, S Beretta, P Bonizzoni, R Dondi, Y Pirola The Computer Journal 58 (7), 1673-1686, 2015	14	2015
On the fixed parameter tractability and approximability of the minimum error correction problem P Bonizzoni, R Dondi, GW Klau, Y Pirola, N Pisanti, S Zaccaria Annual Symposium on Combinatorial Pattern Matching, 100-113, 2015	13	2015
An efficient algorithm for haplotype inference on pedigrees with recombinations and mutations Y Pirola, P Bonizzoni, T Jiang IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB) 9 …, 2012	13	2012
An External-Memory Algorithm for String Graph Construction P Bonizzoni, G Della Vedova, Y Pirola, M Previtali, R Rizzi Algorithmica 78 (2), 394-424, 2017	12	2017
Parameterized complexity of k-anonymity: hardness and tractability P Bonizzoni, G Della Vedova, R Dondi, Y Pirola Journal of combinatorial optimization 26 (1), 19-43, 2013	12	2013
Constructing String Graphs in External Memory P Bonizzoni, G Della Vedova, Y Pirola, M Previtali, R Rizzi arXiv preprint arXiv:1405.7520, 2014	11	2014
Maximum disjoint paths on edge-colored graphs: approximability and tractability P Bonizzoni, R Dondi, Y Pirola Algorithms 6 (1), 1-11, 2013	10	2013
A study of the neutrality of Boolean function landscapes in genetic programming L Vanneschi, Y Pirola, G Mauri, M Tomassini, P Collard, S Verel Theoretical Computer Science 425, 34-57, 2012	10	2012
Haplotype-based prediction of gene alleles using pedigrees and SNP genotypes Y Pirola, G Della Vedova, P Bonizzoni, A Stella, F Biscarini Bioinformatics, Computational Biology and Biomedical Informatics …, 2013	9	2013
PIntron: a fast method for detecting the gene structure due to alternative splicing via maximal pairings of a pattern and a text Y Pirola, R Rizzi, E Picardi, G Pesole, G Della Vedova, P Bonizzoni BMC Bioinformatics 13 (Suppl 5), S2, 2012	9	2012

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