| Tuning hyperparameters of machine learning algorithms and deep neural networks using metaheuristics: A bioinformatics study on biomedical and biological cases S Nematzadeh, F Kiani, M Torkamanian-Afshar, N Aydin Computational biology and chemistry 97, 107619, 2022 | 98 | 2022 |
| Maximizing coverage and maintaining connectivity in WSN and decentralized IoT: an efficient metaheuristic-based method for environment-aware node deployment S Nematzadeh, M Torkamanian-Afshar, A Seyyedabbasi, F Kiani Neural Computing and Applications 35 (1), 611-641, 2023 | 22 | 2023 |
| RPINBASE: An online toolbox to extract features for predicting RNA-protein interactions M Torkamanian-Afshar, H Lanjanian, S Nematzadeh, M Tabarzad, ... Genomics 112 (3), 2623-2632, 2020 | 22 | 2020 |
| High-throughput analysis of the interactions between viral proteins and host cell RNAs H Lanjanian, S Nematzadeh, S Hosseini, M Torkamanian-Afshar, F Kiani, ... Computers in biology and medicine 135, 104611, 2021 | 20 | 2021 |
| In silico design of novel aptamers utilizing a hybrid method of machine learning and genetic algorithm M Torkamanian-Afshar, S Nematzadeh, M Tabarzad, A Najafi, ... Molecular diversity 25, 1395-1407, 2021 | 17 | 2021 |
| Impact of 5HydroxyMethylCytosine (5hmC) on reverse/direct association of cell-cycle, apoptosis, and extracellular matrix pathways in gastrointestinal cancers SS Moravveji, S Khoshbakht, M Mokhtari, M Salimi, H Lanjanian, ... BMC Genomic Data 23 (1), 49, 2022 | 4 | 2022 |
| A novel technique to control the traffic of wireless ad-hoc network by fuzzy systems and prediction with neural network MT Afshar, MT Manzuri 2011 Third International Conference on Computational Intelligence, Modelling …, 2011 | 4 | 2011 |
| A bioinspired discrete heuristic algorithm to generate the effective structural model of a program source code B Arasteh, R Sadegi, K Arasteh, P Gunes, F Kiani, M Torkamanian-Afshar Journal of King Saud University-Computer and Information Sciences 35 (8), 101655, 2023 | 3 | 2023 |
| A model for traffic prediction in wireless ad-hoc networks MT Afshar, MT Manzuri, N Latifi International Conference on Innovative Computing Technology, 328-335, 2011 | 3 | 2011 |
| A Novel Metaheuristic Based Method for Software Mutation Test Using the Discretized and Modified Forrest Optimization Algorithm B Arasteh, FS Gharehchopogh, P Gunes, F Kiani, M Torkamanian-Afshar Journal of Electronic Testing 39 (3), 347-370, 2023 | 2 | 2023 |
| Detecting SQL injection attacks by binary gray wolf optimizer and machine learning algorithms B Arasteh, B Aghaei, B Farzad, K Arasteh, F Kiani, M Torkamanian-Afshar Neural Computing and Applications, 1-22, 2024 | | 2024 |
| A discrete heuristic algorithm with swarm and evolutionary features for data replication problem in distributed systems B Arasteh, T Allahviranloo, P Funes, M Torkamanian-Afshar, M Khari, ... Neural Computing and Applications 35 (31), 23177-23197, 2023 | | 2023 |
| NaProGraph: Network analyzer for interactions between nucleic acids and proteins N Aydin, Z Kurt, M Torkamanian-Afshar Current Bioinformatics, 2023 | | 2023 |
| Co-expression network analysis illustrates the importance of driver genes in colorectal cancer diagnosis, prevention, and therapy A Yari, H MotieGhader, A Samadzadeh, M Amini, Z Ebadi, F Gholipour, ... | | 2022 |
| mRNA-miRNA bipartite network analysis in order to repurpose novel drugs in male infertility S Samadi, Z Ghalandari, H MotieGhader, P Tabrizi-Nezhadi, MN Nabi, ... | | 2022 |
| Application of Protein-Protein interaction network analysis in order to identify Cervical cancer miRNA and mRNA biomarkers P Tabrizi-Nezhadi, H MotieGhader, M Maleki, S Sahin, S Nematzadeh, ... The Scientific World Journal 2023, 2022 | | 2022 |
| RPINaptaBASE: a Database for RNA-Protein Interaction Network Analysis and Aptamer Design M Torkamanian-Afshar, H Lanjanian, S Nematzadeh, M Tabarzad, ... | | 2019 |
| NaProGraph: Network Analyzer for Interactions between Nucleic Acids and Proteins S Nematzadeh, N Aydin, Z Kurt, M Torkamanian-Afshar | | |
