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Michael A Stiffler
Michael A Stiffler
Senior scientist - Dyno Therapeutics
Verified email at dynotx.com
Title
Cited by
Cited by
Year
PDZ domain binding selectivity is optimized across the mouse proteome
MA Stiffler, JR Chen, VP Grantcharova, Y Lei, D Fuchs, JE Allen, ...
Science 317 (5836), 364-369, 2007
4422007
Evolvability as a Function of Purifying Selection in TEM-1 β-Lactamase
MA Stiffler, DR Hekstra, R Ranganathan
Cell 160 (5), 882-892, 2015
3082015
Predicting PDZ domain–peptide interactions from primary sequences
JR Chen, BH Chang, JE Allen, MA Stiffler, G MacBeath
Nature biotechnology 26 (9), 1041-1045, 2008
1712008
Inferring protein 3D structure from deep mutation scans
NJ Rollins, KP Brock, FJ Poelwijk, MA Stiffler, NP Gauthier, C Sander, ...
Nature Genetics, 2019
1472019
Uncovering quantitative protein interaction networks for mouse PDZ domains using protein microarrays
MA Stiffler, VP Grantcharova, M Sevecka, G MacBeath
Journal of the American Chemical Society 128 (17), 5913-5922, 2006
892006
Quantifying protein–protein interactions in high throughput using protein domain microarrays
A Kaushansky, JE Allen, A Gordus, MA Stiffler, ES Karp, BH Chang, ...
Nature protocols 5 (4), 773, 2010
842010
Protein structure from experimental evolution
MA Stiffler, FJ Poelwijk, KP Brock, RR Stein, A Riesselman, J Teyra, ...
Cell Systems, doi: 10.1016/j.cels.2019.11.008, 2020
382020
Fidelity of tRNA 5′-maturation: a possible basis for the functional dependence of archaeal and eukaryal RNase P on multiple protein cofactors
WY Chen, D Singh, LB Lai, MA Stiffler, HD Lai, MP Foster, V Gopalan
Nucleic acids research 40 (10), 4666-4680, 2012
242012
Necl‐4/Cadm4 recruits Par‐3 to the Schwann cell adaxonal membrane
X Meng, P Maurel, I Lam, C Heffernan, MA Stiffler, G McBeath, JL Salzer
Glia 67 (5), 884-895, 2019
132019
3D protein structure from genetic epistasis experiments
NJ Rollins, KP Brock, FJ Poelwijk, MA Stiffler, NP Gauthier, C Sander, ...
bioRxiv, 320721, 2018
82018
A protocol for functional assessment of whole-protein saturation mutagenesis libraries utilizing high-throughput sequencing
MA Stiffler, SK Subramanian, VH Salinas, R Ranganathan
J. Vis. Exp, 2016
82016
The structure-fitness landscape of pairwise relations in generative sequence models
D Marshall, H Wang, M Stiffler, J Dauparas, P Koo, S Ovchinnikov
BioRxiv, 2020.11. 29.402875, 2020
72020
Simultaneous enhancement of multiple functional properties using evolution-informed protein design
B Fram, I Truebridge, Y Su, AJ Riesselman, JB Ingraham, A Passera, ...
bioRxiv, 2023.05. 09.539914, 2023
62023
Efficient Design of Optimized AAV Capsids Using Multi-Property Machine Learning Models Trained across Cells, Organs and Species
S Abestesh, I Akartuna, A Brown, M Cramer, F Damani, J Gerold, J Gorns, ...
MOLECULAR THERAPY 29 (4), 12-12, 2021
12021
AAV Capsid Property Estimation Is Improved by Combining Single-Molecule ID Tags and Hierarchical Bayesian Modeling of Experimental Processes
K Lin, J Otwinowski, B Tobin, S Wolock, J Kwasnieski, C Sengel, R Ogurlu, ...
MOLECULAR THERAPY 29 (4), 98-98, 2021
2021
A Systems-level Investigation of PDZ Domain Binding Selectivity
MA Stiffler
ProQuest, 2008
2008
Substrate Recognition Properties of Zea Mays RNase P: Implications for an RNase P-based Functional Genomics Approach in Plants
MA Stiffler
Ohio State University, 2002
2002
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Articles 1–17