Alexander Lachmann
TitoloCitata daAnno
Enrichr: a comprehensive gene set enrichment analysis web server 2016 update
MV Kuleshov, MR Jones, AD Rouillard, NF Fernandez, Q Duan, Z Wang, ...
Nucleic acids research 44 (W1), W90-W97, 2016
ChEA: transcription factor regulation inferred from integrating genome-wide ChIP-X experiments
A Lachmann, H Xu, J Krishnan, SI Berger, AR Mazloom, A Ma'ayan
Bioinformatics 26 (19), 2438-2444, 2010
Systems-level dynamic analyses of fate change in murine embryonic stem cells
R Lu, F Markowetz, RD Unwin, JT Leek, EM Airoldi, BD MacArthur, ...
Nature 462 (7271), 358, 2009
Global phosphorylation analysis of β-arrestin–mediated signaling downstream of a seven transmembrane receptor (7TMR)
K Xiao, J Sun, J Kim, S Rajagopal, B Zhai, J Villn, W Haas, JJ Kovacs, ...
Proceedings of the National Academy of Sciences 107 (34), 15299-15304, 2010
Functional characterization of somatic mutations in cancer using network-based inference of protein activity
MJ Alvarez, Y Shen, FM Giorgi, A Lachmann, BB Ding, BH Ye, A Califano
Nature genetics 48 (8), 838, 2016
KEA: kinase enrichment analysis
A Lachmann, A Ma'ayan
Bioinformatics 25 (5), 684-686, 2009
Massive mining of publicly available RNA-seq data from human and mouse
A Lachmann, D Torre, AB Keenan, KM Jagodnik, HJ Lee, L Wang, ...
Nature communications 9 (1), 1366, 2018
The library of integrated network-based cellular signatures NIH program: system-level cataloging of human cells response to perturbations
AB Keenan, SL Jenkins, KM Jagodnik, S Koplev, E He, D Torre, Z Wang, ...
Cell systems 6 (1), 13-24, 2018
Polycomb repressive complex 2 (PRC2) silences genes responsible for neurodegeneration
M von Schimmelmann, PA Feinberg, JM Sullivan, SM Ku, A Badimon, ...
Nature neuroscience 19 (10), 1321, 2016
Receptor heteromerization expands the repertoire of cannabinoid signaling in rodent neurons
R Rozenfeld, I Bushlin, I Gomes, N Tzavaras, A Gupta, S Neves, L Battini, ...
PLoS One 7 (1), e29239, 2012
ARACNe-AP: gene network reverse engineering through adaptive partitioning inference of mutual information
A Lachmann, FM Giorgi, G Lopez, A Califano
Bioinformatics 32 (14), 2233-2235, 2016
Lists2Networks: integrated analysis of gene/protein lists
A Lachmann, A Ma'ayan
BMC bioinformatics 11 (1), 87, 2010
GATE: software for the analysis and visualization of high-dimensional time series expression data
BD MacArthur, A Lachmann, IR Lemischka, A Ma'ayan
Bioinformatics 26 (1), 143-144, 2009
BioJupies: automated generation of interactive notebooks for RNA-Seq data analysis in the cloud
D Torre, A Lachmann, A Ma’ayan
Cell systems 7 (5), 556-561. e3, 2018
L1000FWD: fireworks visualization of drug-induced transcriptomic signatures
Z Wang, A Lachmann, AB Keenan, A Ma’ayan
Bioinformatics 34 (12), 2150-2152, 2018
Integration of protein phosphorylation, acetylation, and methylation data sets to outline lung cancer signaling networks
M Grimes, B Hall, L Foltz, T Levy, K Rikova, J Gaiser, W Cook, E Smirnova, ...
Science signaling 11 (531), eaaq1087, 2018
eXpression2Kinases (X2K) web: linking expression signatures to upstream cell signaling networks
DJB Clarke, MV Kuleshov, BM Schilder, D Torre, ME Duffy, AB Keenan, ...
Nucleic acids research 46 (W1), W171-W179, 2018
Detection and removal of spatial bias in multiwell assays
A Lachmann, FM Giorgi, MJ Alvarez, A Califano
Bioinformatics 32 (13), 1959-1965, 2016
Cooperative transcription factor induction mediates hemogenic reprogramming
AM Gomes, I Kurochkin, B Chang, M Daniel, K Law, N Satija, A Lachmann, ...
Cell reports 25 (10), 2821-2835. e7, 2018
Systematic, network-based characterization of therapeutic target inhibitors
Y Shen, MJ Alvarez, B Bisikirska, A Lachmann, R Realubit, S Pampou, ...
PLoS computational biology 13 (10), e1005599, 2017
Il sistema al momento non pu eseguire l'operazione. Riprova pi tardi.
Articoli 1–20