|Evolutionary dynamics of Vibrio cholerae O1 following a single-source introduction to Haiti|
LS Katz, A Petkau, J Beaulaurier, S Tyler, ES Antonova, MA Turnsek, ...
mBio 4 (4), e00398-13, 2013
|The 2010 cholera outbreak in Haiti: how science solved a controversy|
FD Orata, PS Keim, Y Boucher
PLoS Pathogens 10 (4), e1003967, 2014
|Phylogenomic analysis of the gammaproteobacterial methanotrophs (order Methylococcales) calls for the reclassification of members at the genus and species levels|
FD Orata, JP Meier-Kolthoff, D Sauvageau, LY Stein
Frontiers in Microbiology 9, 3162, 2018
|The dynamics of genetic interactions between Vibrio metoecus and Vibrio cholerae, two close relatives co-occurring in the environment|
FD Orata, PC Kirchberger, R Méheust, EJ Barlow, CL Tarr, Y Boucher
Genome Biology and Evolution 7 (10), 2941-2954, 2015
|The out-of-the-delta hypothesis: dense human populations in low-lying river deltas served as agents for the evolution of a deadly pathogen|
Y Boucher, FD Orata, M Alam
Frontiers in Microbiology 6, 1120, 2015
|A genomic island in Vibrio cholerae with VPI-1 site-specific recombination characteristics contains CRISPR-Cas and type VI secretion modules|
M Labbate, FD Orata, NK Petty, ND Jayatilleke, WL King, PC Kirchberger, ...
Scientific Reports 6, 36891, 2016
|A small number of phylogenetically distinct clonal complexes dominate a coastal Vibrio cholerae population|
PC Kirchberger, FD Orata, EJ Barlow, KM Kauffman, RJ Case, MF Polz, ...
Applied and Environmental Microbiology 82 (18), 5576-5586, 2016
|Characterization of clinical and environmental isolates of Vibrio cidicii sp. nov., a close relative of Vibrio navarrensis|
FD Orata, Y Xu, LM Gladney, L Rishishwar, RJ Case, Y Boucher, ...
International Journal of Systematic and Evolutionary Microbiology 66 (10 …, 2016
|Isolation and sequence analysis of the full-length toxR gene of type strain Vibrio campbellii and use of the toxR gene sequence to evaluate variation and relatedness with other …|
FD Orata, CT Hedreyda
Philippine Science Letters 4 (1), 70-80, 2011
|Complete genome sequence of Methylomonas denitrificans strain FJG1, an obligate aerobic methanotroph that can couple methane oxidation with denitrification|
FD Orata, KD Kits, LY Stein
Genome Announcements 6 (17), e00276-18, 2018
|Draft genome sequences of seven bacterial strains isolated from a polymicrobial culture of coccolith-bearing (C-type) Emiliania huxleyi M217|
ARR Rosana, FD Orata, Y Xu, DN Simkus, AR Bramucci, Y Boucher, ...
Genome Announcements 4 (4), e00673-16, 2016
|The bacterial symbiont Phaeobacter inhibens shapes the life history of its algal host Emiliania huxleyi|
AR Bramucci, L Labeeuw, FD Orata, EM Ryan, RR Malmstrom, RJ Case
Frontiers in Marine Science 5, 188, 2018
|Bacillus amyloliquefaciens ssp. plantarum F11 isolated from Algerian salty lake as a source of biosurfactants and bioactive lipopeptides|
MS Daas, JZ Acedo, ARR Rosana, FD Orata, B Reiz, J Zheng, F Nateche, ...
FEMS microbiology letters 365 (1), fnx248, 2018
|Amplification and sequence analysis of the luxA gene in the non-luminescent type strain Vibrio campbellii NBRC 15631|
CT Hedreyda, FD Orata
Philippine Science Letters 4 (2), 114-121, 2011
|Complete genome sequence of Vibrio sp. strain 2521-89, a close relative of Vibrio cholerae isolated from lake water in New Mexico, USA|
K Liang, FD Orata, NS Winkjer, LA Rowe, CL Tarr, Y Boucher
Genome Announcements 5 (35), e00905-17, 2017
|Amplified fragments of ornithine decarboxylase gene, toxR, and an unknown gene marker could distinguish strains of Vibrio harveyi and Vibrio campbellii implicated in shrimp disease|
FD Orata, CT Hedreyda
Philippines Science Letters 3 (2), 30-35, 2010
|Draft genome sequences of four bacterial strains isolated from a polymicrobial culture of naked (N-type) Emiliania huxleyi CCMP1516|
FD Orata, ARR Rosana, Y Xu, DN Simkus, AR Bramucci, Y Boucher, ...
Genome Announcements 4 (4), e00674-16, 2016
|A Vibrio cholerae core genome multilocus sequence typing scheme to facilitate the epidemiological study of cholera|
KYH Liang, FD Orata, MT Islam, T Nasreen, M Alam, CL Tarr, YF Boucher
Journal of Bacteriology, 2020
|Culture‐independent tracking of Vibrio cholerae lineages reveals complex spatiotemporal dynamics in a natural population|
PC Kirchberger, FD Orata, T Nasreen, KM Kauffman, CL Tarr, RJ Case, ...
Environmental Microbiology, 2020
|Simultaneous quantification of Vibrio metoecus and Vibrio cholerae with its O1 serogroup and toxigenic subpopulations in environmental reservoirs|
T Nasreen, NAS Hussain, MT Islam, FD Orata, PC Kirchberger, M Alam, ...
bioRxiv, 822551, 2019