Integrated genomic characterization reveals novel, therapeutically relevant drug targets in FGFR and EGFR pathways in sporadic intrahepatic cholangiocarcinoma MJ Borad, MD Champion, JB Egan, WS Liang, R Fonseca, AH Bryce, ... PLoS genetics 10 (2), e1004135, 2014 | 355 | 2014 |
MicroRNA‐328 is associated with (non‐small) cell lung cancer (NSCLC) brain metastasis and mediates NSCLC migration S Arora, AR Ranade, NL Tran, S Nasser, S Sridhar, RL Korn, JTD Ross, ... International journal of cancer 129 (11), 2621-2631, 2011 | 202 | 2011 |
Integrated genomic and epigenomic analysis of breast cancer brain metastasis B Salhia, J Kiefer, JTD Ross, R Metapally, RA Martinez, KN Johnson, ... PloS one 9 (1), e85448, 2014 | 160 | 2014 |
Integrated genomic analyses reveal frequent TERT aberrations in acral melanoma WS Liang, W Hendricks, J Kiefer, J Schmidt, S Sekar, J Carpten, ... Genome research 27 (4), 524-532, 2017 | 124 | 2017 |
A pilot precision medicine trial for children with diffuse intrinsic pontine glioma—PNOC003: A report from the Pacific Pediatric Neuro‐Oncology Consortium S Mueller, P Jain, WS Liang, L Kilburn, C Kline, N Gupta, E Panditharatna, ... International journal of cancer 145 (7), 1889-1901, 2019 | 108 | 2019 |
Genomic view of bipolar disorder revealed by whole genome sequencing in a genetic isolate B Georgi, D Craig, RL Kember, W Liu, I Lindquist, S Nasser, C Brown, ... PLoS genetics 10 (3), e1004229, 2014 | 93 | 2014 |
miRNA expression profiling in migrating glioblastoma cells: regulation of cell migration and invasion by miR-23b via targeting of Pyk2 JC Loftus, JTD Ross, KM Paquette, VM Paulino, S Nasser, Z Yang, ... PloS one 7 (6), e39818, 2012 | 77 | 2012 |
Prospective feasibility trial for genomics-informed treatment in recurrent and progressive glioblastoma SA Byron, NL Tran, RF Halperin, JJ Phillips, JG Kuhn, JF De Groot, ... Clinical Cancer Research 24 (2), 295-305, 2018 | 73 | 2018 |
A modified fuzzy k-means clustering using expectation maximization S Nasser, R Alkhaldi, G Vert 2006 IEEE international conference on fuzzy systems, 231-235, 2006 | 68 | 2006 |
A somatic reference standard for cancer genome sequencing DW Craig, S Nasser, R Corbett, SK Chan, L Murray, C Legendre, ... Scientific reports 6 (1), 24607, 2016 | 67 | 2016 |
Comparison of analysis tools for miRNA high throughput sequencing using nerve crush as a model RPR Metpally, S Nasser, I Malenica, A Courtright, E Carlson, L Ghaffari, ... Frontiers in genetics 4, 20, 2013 | 67 | 2013 |
Multiscale, multimodal analysis of tumor heterogeneity in IDH1 mutant vs wild-type diffuse gliomas ME Berens, A Sood, JS Barnholtz-Sloan, JF Graf, S Cho, S Kim, J Kiefer, ... PLoS One 14 (12), e0219724, 2019 | 33 | 2019 |
Multiple sequence alignment using fuzzy logic S Nasser, GL Vert, M Nicolescu, A Murray 2007 IEEE Symposium on Computational Intelligence and Bioinformatics and …, 2007 | 30 | 2007 |
Clinical implementation of integrated genomic profiling in patients with advanced cancers MJ Borad, JB Egan, RM Condjella, WS Liang, R Fonseca, NR Ritacca, ... Scientific reports 6 (1), 25, 2016 | 21 | 2016 |
Simultaneous characterization of somatic events and HPV-18 integration in a metastatic cervical carcinoma patient using DNA and RNA sequencing WS Liang, J Aldrich, S Nasser, A Kurdoglu, L Phillips, R Reiman, ... International Journal of Gynecologic Cancer 24 (2), 2014 | 21 | 2014 |
An integrated framework for reporting clinically relevant biomarkers from paired tumor/normal genomic and transcriptomic sequencing data in support of clinical trials in … S Nasser, AA Kurdolgu, T Izatt, J Aldrich, ML Russell, A Christoforides, ... Pacific Symposium on Biocomputing Co-Chairs, 56-67, 2014 | 18 | 2014 |
Identifying miRNA and imaging features associated with metastasis of lung cancer to the brain S Nasser, AR Ranade, S Sridhart, L Haney, RL Korn, MB Gotway, ... 2009 IEEE International Conference on Bioinformatics and Biomedicine, 246-251, 2009 | 15 | 2009 |
Unbiased cell surface proteomics identifies SEMA4A as an effective immunotherapy target for myeloma GSF Anderson, J Ballester-Beltran, G Giotopoulos, JA Guerrero, S Surget, ... Blood, The Journal of the American Society of Hematology 139 (16), 2471-2482, 2022 | 14 | 2022 |
Scalable generation of mesenchymal stem cells and adipocytes from human pluripotent stem cells M Karam, I Younis, NR Elareer, S Nasser, EM Abdelalim Cells 9 (3), 710, 2020 | 14 | 2020 |
A systematic approach toward gene annotation of the hallmarks of cancer J Kiefer, S Nasser, J Graf, C Kodira, F Ginty, L Newberg, A Sood, ... Cancer Research 77 (13_Supplement), 3589-3589, 2017 | 14 | 2017 |