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giovanni scala
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Sex-related alterations of gut microbiota composition in the BTBR mouse model of autism spectrum disorder
L Coretti, C Cristiano, E Florio, G Scala, A Lama, S Keller, M Cuomo, ...
Scientific reports 7 (1), 45356, 2017
1672017
Genome-wide mapping of 8-oxo-7, 8-dihydro-2′-deoxyguanosine reveals accumulation of oxidatively-generated damage at DNA replication origins within transcribed long genes of …
S Amente, G Di Palo, G Scala, T Castrignanò, F Gorini, S Cocozza, ...
Nucleic acids research 47 (1), 221-236, 2019
882019
eUTOPIA: solUTion for Omics data PreprocessIng and Analysis
VS Marwah, G Scala, PAS Kinaret, A Serra, H Alenius, V Fortino, D Greco
Source code for biology and medicine 14, 1-12, 2019
442019
Multi-omics analysis of ten carbon nanomaterials effects highlights cell type specific patterns of molecular regulation and adaptation
G Scala, P Kinaret, V Marwah, J Sund, V Fortino, D Greco
NanoImpact 11, 99-108, 2018
442018
Carbon nanomaterials promote M1/M2 macrophage activation
PAS Kinaret, G Scala, A Federico, J Sund, D Greco
Small 16 (21), 1907609, 2020
412020
Gain-of-function CEBPE mutation causes noncanonical autoinflammatory inflammasomopathy
H Göös, CL Fogarty, B Sahu, V Plagnol, K Rajamäki, K Nurmi, X Liu, ...
Journal of Allergy and Clinical Immunology 144 (5), 1364-1376, 2019
412019
Towards a comprehensive view of 8-oxo-7, 8-dihydro-2’-deoxyguanosine: Highlighting the intertwined roles of DNA damage and epigenetics in genomic instability
F Gorini, G Scala, MS Cooke, B Majello, S Amente
DNA repair 97, 103027, 2021
392021
The genomic landscape of 8-oxodG reveals enrichment at specific inherently fragile promoters
F Gorini, G Scala, G Di Palo, GI Dellino, S Cocozza, PG Pelicci, L Lania, ...
Nucleic Acids Research 48 (8), 4309-4324, 2020
392020
FunMappOne: a tool to hierarchically organize and visually navigate functional gene annotations in multiple experiments
G Scala, A Serra, VS Marwah, LA Saarimäki, D Greco
BMC bioinformatics 20, 1-7, 2019
362019
ampliMethProfiler: a pipeline for the analysis of CpG methylation profiles of targeted deep bisulfite sequenced amplicons
G Scala, O Affinito, D Palumbo, E Florio, A Monticelli, G Miele, L Chiariotti, ...
BMC bioinformatics 17, 1-12, 2016
332016
A review of COVID-19 biomarkers and drug targets: resources and tools
FP Caruso, G Scala, L Cerulo, M Ceccarelli
Briefings in bioinformatics 22 (2), 701-713, 2021
312021
Cholesteatoma vs granulation tissue: a differential diagnosis by DWI-MRI apparent diffusion coefficient
M Cavaliere, AM Di Lullo, E Cantone, G Scala, A Elefante, C Russo, ...
European Archives of Oto-Rhino-Laryngology 275, 2237-2243, 2018
312018
Inform: inference of network response modules
VS Marwah, PAS Kinaret, A Serra, G Scala, A Lauerma, V Fortino, ...
Bioinformatics 34 (12), 2136-2138, 2018
302018
Immune‐microbiota interaction in Finnish and Russian Karelia young people with high and low allergy prevalence
L Ruokolainen, N Fyhrquist, T Laatikainen, P Auvinen, V Fortino, G Scala, ...
Clinical & Experimental Allergy 50 (10), 1148-1158, 2020
262020
Tracking the evolution of epialleles during neural differentiation and brain development: D-Aspartate oxidase as a model gene
E Florio, S Keller, L Coretti, O Affinito, G Scala, F Errico, A Fico, F Boscia, ...
Epigenetics 12 (1), 41-54, 2017
242017
DNA sequence context as a marker of CpG methylation instability in normal and cancer tissues
G Scala, A Federico, D Palumbo, S Cocozza, D Greco
Scientific reports 10 (1), 1721, 2020
202020
DNA methylation levels in mononuclear leukocytes from the mother and her child are associated with IgE sensitization to allergens in early life
N Acevedo, G Scala, SK Merid, P Frumento, S Bruhn, A Andersson, ...
International journal of molecular sciences 22 (2), 801, 2021
192021
Feature set optimization in biomarker discovery from genome-scale data
V Fortino, G Scala, D Greco
Bioinformatics 36 (11), 3393-3400, 2020
192020
Simulating gene-gene and gene-environment interactions in complex diseases: Gene-Environment iNteraction Simulator 2
M Pinelli, G Scala, R Amato, S Cocozza, G Miele
BMC bioinformatics 13, 1-11, 2012
192012
Toxicogenomics analysis of dynamic dose-response in macrophages highlights molecular alterations relevant for multi-walled carbon nanotube-induced lung fibrosis
LA Saarimäki, PAS Kinaret, G Scala, G del Giudice, A Federico, A Serra, ...
NanoImpact 20, 100274, 2020
182020
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