Damien M. de Vienne
Damien M. de Vienne
CR, CNRS, Laboratoire de Biométrie et Biologie Évolutive (LBBE), Univ Lyon, France
Verified email at univ-lyon1.fr
TitleCited byYear
Speciation in fungi
T Giraud, G Refrégier, M Le Gac, DM de Vienne, ME Hood
Fungal Genetics and Biology 45 (6), 791-802, 2008
2472008
Cospeciation vs host‐shift speciation: methods for testing, evidence from natural associations and relation to coevolution
DM De Vienne, G Refrégier, M López‐Villavicencio, A Tellier, ME Hood, ...
New Phytologist 198 (2), 347-385, 2013
2062013
A congruence index for testing topological similarity between trees
DM de Vienne, T Giraud, OC Martin
Bioinformatics 23 (23), 3119-3124, 2007
1492007
Fungal evolutionary genomics provides insight into the mechanisms of adaptive divergence in eukaryotes
P Gladieux, J Ropars, H Badouin, A Branca, G Aguileta, DM De Vienne, ...
Molecular ecology 23 (4), 753-773, 2014
982014
Phylogenetic determinants of potential host shifts in fungal pathogens
DM De Vienne, ME Hood, T Giraud
Journal of Evolutionary Biology 22 (12), 2532-2541, 2009
812009
High variability of mitochondrial gene order among fungi
G Aguileta, DM De Vienne, ON Ross, ME Hood, T Giraud, E Petit, ...
Genome biology and evolution 6 (2), 451-465, 2014
762014
When can host shifts produce congruent host and parasite phylogenies? A simulation approach
DM De Vienne, T Giraud, JA Shykoff
Journal of evolutionary biology 20 (4), 1428-1438, 2007
662007
Pitfalls in supermatrix phylogenomics
H Philippe, DM de Vienne, V Ranwez, B Roure, D Baurain, F Delsuc
European Journal of Taxonomy 283, 1-25, 2017
422017
Phylo-MCOA: a fast and efficient method to detect outlier genes and species in phylogenomics using multiple co-inertia analysis
DM de Vienne, S Ollier, G Aguileta
Molecular Biology and Evolution 29 (6), 1587-1598, 2012
422012
Hybrid sterility and inviability in the parasitic fungal species complex Microbotryum
DM De Vienne, G Refrégier, ME Hood, A Guigue, B Devier, E Vercken, ...
Journal of evolutionary biology 22 (4), 683-698, 2009
382009
Degeneration of the nonrecombining regions in the mating-type chromosomes of the anther-smut fungi
E Fontanillas, ME Hood, H Badouin, E Petit, V Barbe, J Gouzy, ...
Molecular biology and evolution 32 (4), 928-943, 2014
352014
Sex in Penicillium: Combined phylogenetic and experimental approaches
M López-Villavicencio, G Aguileta, T Giraud, DM de Vienne, S Lacoste, ...
Fungal genetics and biology 47 (8), 693-706, 2010
352010
Lineage selection and the maintenance of sex
DM de Vienne, T Giraud, PH Gouyon
PLoS One 8 (6), e66906, 2013
302013
LINKAGE TO THE MATING‐TYPE LOCUS ACROSS THE GENUS MICROBOTRYUM: INSIGHTS INTO NONRECOMBINING CHROMOSOMES
E Petit, T Giraud, DM de Vienne, MA Coelho, G Aguileta, J Amselem, ...
Evolution: International Journal of Organic Evolution 66 (11), 3519-3533, 2012
262012
Euclidean nature of phylogenetic distance matrices
DM de Vienne, G Aguileta, S Ollier
Systematic biology 60 (6), 826-832, 2011
262011
Multiple convergent supergene evolution events in mating-type chromosomes
S Branco, F Carpentier, RCR de la Vega, H Badouin, A Snirc, S Le Prieur, ...
Nature communications 9 (1), 2000, 2018
172018
phylobase: Base package for phylogenetic structures and comparative data
R Hackathon, B Bolker, M Butler, P Cowan, D De Vienne, D Eddelbuettel, ...
R package version 0.8 4, 2013
172013
Package ‘ape’—analyses of phylogenetics and evolution
E Paradis, B Bolker, J Claude, H Sien Cuong, R Desper, B Durand, ...
URL [http://cran. r-project. org/web/packages/ape/ape. pdf], 1-222, 2011
172011
RiboDB database: a comprehensive resource for prokaryotic systematics
F Jauffrit, S Penel, S Delmotte, C Rey, DM de Vienne, M Gouy, ...
Molecular biology and evolution 33 (8), 2170-2172, 2016
122016
phylobase: Base package for phylogenetic structures and comparative data
B Bolker, M Butler, P Cowan, D de Vienne, D Eddelbuettel, M Holder, ...
R package version 0.8. 0, 2015
122015
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Articles 1–20