Turkan Haliloglu
Turkan Haliloglu
Verified email at boun.edu.tr
TitleCited byYear
Gaussian dynamics of folded proteins
T Haliloglu, I Bahar, B Erman
Physical review letters 79 (16), 3090, 1997
7131997
HingeProt: automated prediction of hinges in protein structures
U Emekli, D Schneidman‐Duhovny, HJ Wolfson, R Nussinov, T Haliloglu
Proteins: Structure, Function, and Bioinformatics 70 (4), 1219-1227, 2008
2032008
Dynamic allostery: linkers are not merely flexible
B Ma, CJ Tsai, T Haliloğlu, R Nussinov
Structure 19 (7), 907-917, 2011
1702011
Community-wide assessment of protein-interface modeling suggests improvements to design methodology
SJ Fleishman, TA Whitehead, EM Strauch, JE Corn, S Qin, HX Zhou, ...
Journal of molecular biology 414 (2), 289-302, 2011
1252011
Structure‐based analysis of protein dynamics: comparison of theoretical results for hen lysozyme with X‐ray diffraction and NMR relaxation data
T Haliloglu, I Bahar
Proteins: Structure, Function, and Bioinformatics 37 (4), 654-667, 1999
1091999
Mechanisms of the exchange of diblock copolymers between micelles at dynamic equilibrium
T Haliloǧlu, I Bahar, B Erman, WL Mattice
Macromolecules 29 (13), 4764-4771, 1996
981996
Efficient characterization of collective motions and interresidue correlations in proteins by low-resolution simulations
I Bahar, B Erman, T Haliloglu, RL Jernigan
Biochemistry 36 (44), 13512-13523, 1997
821997
Emergence and transmission of arbovirus evolutionary intermediates with epidemic potential
KA Stapleford, LL Coffey, S Lay, AV Bordería, V Duong, O Isakov, ...
Cell host & microbe 15 (6), 706-716, 2014
772014
How similar are protein folding and protein binding nuclei? Examination of vibrational motions of energy hot spots and conserved residues
T Haliloglu, O Keskin, B Ma, R Nussinov
Biophysical journal 88 (3), 1552-1559, 2005
652005
Extreme entropy–enthalpy compensation in a drug-resistant variant of HIV-1 protease
NM King, M Prabu-Jeyabalan, RM Bandaranayake, MNL Nalam, ...
ACS chemical biology 7 (9), 1536-1546, 2012
602012
Dynamics of preferential substrate recognition in HIV-1 protease: redefining the substrate envelope
A Özen, T Haliloğlu, CA Schiffer
Journal of molecular biology 410 (4), 726-744, 2011
592011
Cooperative fluctuations of unliganded and substrate‐bound HIV‐1 protease: a structure‐based analysis on a variety of conformations from crystallography and molecular dynamics …
N Kurt, WRP Scott, CA Schiffer, T Haliloglu
Proteins: Structure, Function, and Bioinformatics 51 (3), 409-422, 2003
592003
Adaptability of protein structures to enable functional interactions and evolutionary implications
T Haliloglu, I Bahar
Current opinion in structural biology 35, 17-23, 2015
582015
Molecular dynamics simulations on constraint metal binding peptides
N Kantarci, C Tamerler, M Sarikaya, T Haliloglu, P Doruker
Polymer 46 (12), 4307-4313, 2005
582005
Interactions of hydrophobic peptides with lipid bilayers: Monte Carlo simulations with M2δ
A Kessel, D Shental-Bechor, T Haliloglu, N Ben-Tal
Biophysical journal 85 (6), 3431-3444, 2003
572003
Coarse‐grained simulations of conformational dynamics of proteins: Application to apomyoglobin
T Haliloglu, I Bahar
Proteins: Structure, Function, and Bioinformatics 31 (3), 271-281, 1998
561998
Conformational transition pathways explored by Monte Carlo simulation integrated with collective modes
N Kantarci-Carsibasi, T Haliloglu, P Doruker
Biophysical journal 95 (12), 5862-5873, 2008
522008
Monte Carlo studies of folding, dynamics, and stability in α-helices
D Shental-Bechor, S Kirca, N Ben-Tal, T Haliloglu
Biophysical journal 88 (4), 2391-2402, 2005
512005
Cα-trace model of the transmembrane domain of human copper transporter 1, motion and functional implications
M Schushan, Y Barkan, T Haliloglu, N Ben-Tal
Proceedings of the National Academy of Sciences 107 (24), 10908-10913, 2010
482010
MCPath: Monte Carlo path generation approach to predict likely allosteric pathways and functional residues
C Kaya, A Armutlulu, S Ekesan, T Haliloglu
Nucleic acids research 41 (W1), W249-W255, 2013
472013
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Articles 1–20