Stefano de Pretis
Stefano de Pretis
Postdoc, Center for Genomic Science of IIT@SEMM
Email verificata su iit.it
Titolo
Citata da
Citata da
Anno
Selective transcriptional regulation by Myc in cellular growth control and lymphomagenesis
A Sabo, TR Kress, M Pelizzola, S De Pretis, MM Gorski, A Tesi, MJ Morelli, ...
Nature 511 (7510), 488-492, 2014
3122014
Degradation dynamics of microRNAs revealed by a novel pulse-chase approach
MJ Marzi, F Ghini, B Cerruti, S De Pretis, P Bonetti, C Giacomelli, ...
Genome research 26 (4), 554-565, 2016
932016
Integrative classification of human coding and noncoding genes through RNA metabolism profiles
N Mukherjee, L Calviello, A Hirsekorn, S de Pretis, M Pelizzola, U Ohler
Nature structural & molecular biology 24 (1), 86, 2017
792017
methylPipe and compEpiTools: a suite of R packages for the integrative analysis of epigenomics data
K Kishore, S de Pretis, R Lister, MJ Morelli, V Bianchi, B Amati, JR Ecker, ...
BMC bioinformatics 16 (1), 313, 2015
462015
Transcription of mammalian cis-regulatory elements is restrained by actively enforced early termination
LMI Austenaa, I Barozzi, M Simonatto, S Masella, G Della Chiara, ...
Molecular cell 60 (3), 460-474, 2015
402015
INSPEcT: a computational tool to infer mRNA synthesis, processing and degradation dynamics from RNA-and 4sU-seq time course experiments
S De Pretis, T Kress, MJ Morelli, GEM Melloni, L Riva, B Amati, ...
Bioinformatics 31 (17), 2829-2835, 2015
382015
Integrated systems for NGS data management and analysis: open issues and available solutions
V Bianchi, A Ceol, AGE Ogier, S De Pretis, E Galeota, K Kishore, P Bora, ...
Frontiers in genetics 7, 75, 2016
342016
DOTS-Finder: a comprehensive tool for assessing driver genes in cancer genomes
GEM Melloni, AGE Ogier, S de Pretis, L Mazzarella, M Pelizzola, ...
Genome medicine 6 (6), 44, 2014
282014
Integrative analysis of RNA polymerase II and transcriptional dynamics upon MYC activation
S De Pretis, TR Kress, MJ Morelli, A Sab, C Locarno, A Verrecchia, ...
Genome research 27 (10), 1658-1664, 2017
272017
LowMACA: exploiting protein family analysis for the identification of rare driver mutations in cancer
GEM Melloni, S de Pretis, L Riva, M Pelizzola, A Col, J Costanza, ...
BMC bioinformatics 17 (1), 1-12, 2016
112016
Computational and experimental methods to decipher the epigenetic code
S de Pretis, M Pelizzola
Frontiers in genetics 5, 335, 2014
82014
An early Myc‐dependent transcriptional program orchestrates cell growth during B‐cell activation
A Tesi, S de Pretis, M Furlan, M Filipuzzi, MJ Morelli, A Andronache, ...
EMBO reports 20 (9), e47987, 2019
7*2019
m6A-Dependent RNA dynamics in T Cell differentiation
M Furlan, E Galeota, S De Pretis, M Caselle, M Pelizzola
Genes 10 (1), 28, 2019
52019
Selective transcriptional regulation by Myc: Experimental design and computational analysis of high-throughput sequencing data
M Pelizzola, MJ Morelli, A Sab, TR Kress, S de Pretis, B Amati
Data in brief 3, 40-46, 2015
32015
Genome-wide dynamics of RNA synthesis, processing and degradation without RNA metabolic labeling
M Furlan, E Galeota, N Del Gaudio, E Dassi, M Caselle, S de Pretis, ...
bioRxiv, 520155, 2019
2*2019
Translation is required for miRNA-dependent decay of endogenous transcripts.
A Biasini, S De Pretis, JY Tan, B Abdulkarim, H Wischnewski, R Dreos, ...
BioRxiv, 2020
12020
Direct RNA Sequencing for the Study of Synthesis, Processing, and Degradation of Modified Transcripts
M Furlan, I Tanaka, T Leonardi, S de Pretis, M Pelizzola
Frontiers in Genetics 11, 394, 2020
2020
INSPEcT-GUI reveals the impact of the kinetic rates of RNA synthesis, processing, and degradation, on premature and mature RNA species
S De Pretis, M Furlan, M Pelizzola
Frontiers in Genetics 11, 759, 2020
2020
Il sistema al momento non pu eseguire l'operazione. Riprova pi tardi.
Articoli 1–18