Nathan Edwards
Nathan Edwards
Department of Biochemistry and Molecular & Cellular Biology, Georgetown University
Verified email at - Homepage
Cited by
Cited by
Integrated proteogenomic characterization of human high-grade serous ovarian cancer
H Zhang, T Liu, Z Zhang, SH Payne, B Zhang, JE McDermott, JY Zhou, ...
Cell 166 (3), 755-765, 2016
SCOPE: a probabilistic model for scoring tandem mass spectra against a peptide database
V Bafna, N Edwards
Bioinformatics 17 (suppl_1), S13-S21, 2001
Proteogenomic analysis of human colon cancer reveals new therapeutic opportunities
S Vasaikar, C Huang, X Wang, VA Petyuk, SR Savage, B Wen, Y Dou, ...
Cell 177 (4), 1035-1049. e19, 2019
Whole-genome shotgun assembly and comparison of human genome assemblies
S Istrail, GG Sutton, L Florea, AL Halpern, CM Mobarry, R Lippert, ...
Proceedings of the National Academy of Sciences 101 (7), 1916-1921, 2004
Integrated proteogenomic characterization of clear cell renal cell carcinoma
DJ Clark, SM Dhanasekaran, F Petralia, J Pan, X Song, Y Hu, ...
Cell 179 (4), 964-983. e31, 2019
Deconvolution and database search of complex tandem mass spectra of intact proteins
X Liu, Y Inbar, PC Dorrestein, C Wynne, N Edwards, P Souda, ...
Molecular & Cellular Proteomics 9 (12), 2772-2782, 2010
The CPTAC data portal: a resource for cancer proteomics research
NJ Edwards, M Oberti, RR Thangudu, S Cai, PB McGarvey, S Jacob, ...
Journal of proteome research 14 (6), 2707-2713, 2015
A unique Mycobacterium ESX‐1 protein co‐secretes with CFP‐10/ESAT‐6 and is necessary for inhibiting phagosome maturation
J Xu, O Laine, M Masciocchi, J Manoranjan, J Smith, SJ Du, N Edwards, ...
Molecular microbiology 66 (3), 787-800, 2007
Proteogenomic characterization reveals therapeutic vulnerabilities in lung adenocarcinoma
MA Gillette, S Satpathy, S Cao, SM Dhanasekaran, SV Vasaikar, K Krug, ...
Cell 182 (1), 200-225. e35, 2020
A survey of computational methods for determining haplotypes
BV Halldórsson, V Bafna, N Edwards, R Lippert, S Yooseph, S Istrail
RECOMB Workshop on Computational Methods for SNPs and Haplotype Inference, 26-47, 2002
Exosomes from myeloid-derived suppressor cells carry biologically active proteins
M Burke, W Choksawangkarn, N Edwards, S Ostrand-Rosenberg, ...
Journal of proteome research 13 (2), 836-843, 2014
Proteogenomic characterization of endometrial carcinoma
Y Dou, EA Kawaler, DC Zhou, MA Gritsenko, C Huang, L Blumenberg, ...
Cell 180 (4), 729-748. e26, 2020
Exploring site-specific N-glycosylation microheterogeneity of haptoglobin using glycopeptide CID tandem mass spectra and glycan database search
KB Chandler, P Pompach, R Goldman, N Edwards
Journal of proteome research 12 (8), 3652-3666, 2013
Semi-automated identification of N-Glycopeptides by hydrophilic interaction chromatography, nano-reverse-phase LC–MS/MS, and glycan database search
P Pompach, KB Chandler, R Lan, N Edwards, R Goldman
Journal of proteome research 11 (3), 1728-1740, 2012
Site-specific glycoforms of haptoglobin in liver cirrhosis and hepatocellular carcinoma
P Pompach, Z Brnakova, M Sanda, J Wu, N Edwards, R Goldman
Molecular & Cellular Proteomics 12 (5), 1281-1293, 2013
High-throughput middle-down analysis using an orbitrap
J Cannon, K Lohnes, C Wynne, Y Wang, N Edwards, C Fenselau
Journal of proteome research 9 (8), 3886-3890, 2010
Novel peptide identification from tandem mass spectra using ESTs and sequence database compression
NJ Edwards
Molecular systems biology 3 (1), 102, 2007
Top-down identification of protein biomarkers in bacteria with unsequenced genomes
C Wynne, C Fenselau, PA Demirev, N Edwards
Analytical chemistry 81 (23), 9633-9642, 2009
On de novo interpretation of tandem mass spectra for peptide identification
V Bafna, N Edwards
Proceedings of the seventh annual international conference on Research in …, 2003
Evaluation of microwave-accelerated residue-specific acid cleavage for proteomic applications
S Swatkoski, P Gutierrez, C Wynne, A Petrov, JD Dinman, N Edwards, ...
The Journal of Proteome Research 7 (2), 579-586, 2008
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