Riccardo Colombo
TitoloCitata daAnno
Fuzzy Self-Tuning PSO: A Settings-Free Algorithm for Global Optimization Autori
MS Nobile, P Cazzaniga, D Besozzi, R Colombo, G Mauri, G Pasi
Swarm and Evolutionary Computation, 2017
44*2017
Computational strategies for a system-level understanding of metabolism
P Cazzaniga, C Damiani, D Besozzi, R Colombo, MS Nobile, D Gaglio, ...
Metabolites 4 (4), 1034-1087, 2014
382014
Proactive particles in swarm optimization: a self-tuning algorithm based on fuzzy logic
MS Nobile, G Pasi, P Cazzaniga, D Besozzi, R Colombo, G Mauri
2015 IEEE International Conference on Fuzzy Systems (FUZZ-IEEE), 1-8, 2015
232015
Zooming-in on cancer metabolic rewiring with tissue specific constraint-based models
M Di Filippo, R Colombo, C Damiani, D Pescini, D Gaglio, M Vanoni, ...
Computational biology and chemistry 62, 60-69, 2016
192016
An ensemble evolutionary constraint-based approach to understand the emergence of metabolic phenotypes
C Damiani, D Pescini, R Colombo, S Molinari, L Alberghina, M Vanoni, ...
Natural Computing 13 (3), 321-331, 2014
162014
A metabolic core model elucidates how enhanced utilization of glucose and glutamine, with enhanced glutamine-dependent lactate production, promotes cancer cell growth: The …
C Damiani, R Colombo, D Gaglio, F Mastroianni, D Pescini, ...
PLOS Computational Biology 13 (9), e1005758, 2017
152017
popFBA: tackling intratumour heterogeneity with Flux Balance Analysis
C Damiani, M Di Filippo, D Pescini, D Maspero, R Colombo, G Mauri
Bioinformatics 33 (14), i311-i318, 2017
82017
In vivo and in silico analysis of PCNA ubiquitylation in the activation of the Post Replication Repair pathway in S. cerevisiae
F Amara, R Colombo, P Cazzaniga, D Pescini, A Csikász-Nagy, ...
BMC systems biology 7 (1), 24, 2013
62013
Constraint-based modeling and simulation of cell populations
M Di Filippo, C Damiani, R Colombo, D Pescini, G Mauri
Italian Workshop on Artificial Life and Evolutionary Computation, 126-137, 2016
42016
Integration of single-cell RNA-seq data into population models to characterize cancer metabolism
C Damiani, D Maspero, M Di Filippo, R Colombo, D Pescini, A Graudenzi, ...
PLoS computational biology 15 (2), e1006733, 2019
32019
COSYS: A Computational Infrastructure for Systems Biology
F Cumbo, MS Nobile, C Damiani, R Colombo, G Mauri, P Cazzaniga
Computational Intelligence Methods for Bioinformatics and Biostatistics …, 2017
32017
Linking alterations in metabolic fluxes with shifts in metabolite levels by means of kinetic modeling
C Damiani, R Colombo, M Di Filippo, D Pescini, G Mauri
Italian Workshop on Artificial Life and Evolutionary Computation, 138-148, 2016
32016
SupraBiology 2014: Promoting UK-China collaboration on Systems Biology and High Performance Computing
E Murabito, R Colombo, C Wu, M Verma, S Rehman, J Snoep, SL Peng, ...
Quantitative Biology, 1-8, 2015
32015
-Omics and Clinical Data Integration
G De Sanctis, R Colombo, C Damiani, E Sacco, M Vanoni
Integration of Omics Approaches and Systems Biology for Clinical …, 2018
22018
Constraining Mechanism Based Simulations to Identify Ensembles of Parametrizations to Characterize Metabolic Features
R Colombo, C Damiani, G Mauri, D Pescini
Computational Intelligence Methods for Bioinformatics and Biostatistics …, 2017
22017
Integration of single-cell RNA-seq data into metabolic models to characterize tumour cell populations
C Damiani, D Maspero, M Di Filippo, R Colombo, D Pescini, A Graudenzi, ...
bioRxiv, 256644, 2018
12018
GPU-powered sensitivity analysis and parameter estimation of a reaction-based model of the Post Replication Repair pathway in yeast
P Cazzaniga, R Colombo, MS Nobile, D Pescini, G Mauri, D Besozzi
WCSB 2013-tHE 10th International Workshop on Computational Systems Biology …, 2013
12013
The Influence of Nutrients Diffusion on a Metabolism-driven Model of a Multi-cellular System
D Maspero, C Damiani, M Antoniotti, A Graudenzi, M Di Filippo, M Vanoni, ...
Fundamenta Informaticae 171 (1-4), 279-295, 2020
2020
Emerging ensembles of kinetic parameters to characterize observed metabolic phenotypes
R Colombo, C Damiani, D Gilbert, M Heiner, G Mauri, D Pescini
BMC Bioinformatics 19 (7), 251, 2018
2018
Emerging ensembles of kinetic parameters to identify experimentally observed phenotypes
R Colombo, C Damiani, D Gilbert, M Heiner, G Mauri, D Pescini
BioMed Central, 2018
2018
Il sistema al momento non può eseguire l'operazione. Riprova più tardi.
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