Zsuzsanna Lipták

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Gabriele FiciAssociate Professor, Università di Palermo, ItalyVerified email at unipa.it
Sebastian BöckerProfessor für Bioinformatik, FSU JenaVerified email at uni-jena.de
Ferdinando CicaleseAssociate Professor of Computer Science, University of VeronaVerified email at dia.unisa.it
Péter BurcsiEötvös Loránd UniversityVerified email at inf.elte.hu
Mark CieliebakZurich University of Applied SciencesVerified email at zhaw.ch
Massimiliano RossiIlluminaVerified email at illumina.com
Golnaz BadkobehCity, University of LondonVerified email at city.ac.uk
Scott HazelhurstElectrical and Information Engineering, University of the WitwatersrandVerified email at wits.ac.za
Sara GiulianiUniversity of VeronaVerified email at univr.it
Joe SawadaProfessor, Computer Science, University of GuelphVerified email at uoguelph.ca
Matthias Müller-FischerPrincipal Engineer at NVIDIAVerified email at mueller-fischer.com
Wilhelm GruissemETH ZurichVerified email at ethz.ch
Marinella SciortinoFull Professor, University of PalermoVerified email at unipa.it
Frank RuskeyComputer Science, University of VictoriaVerified email at cs.uvic.ca
Jonas GrossmannSenior Proteome Informatic Expert, ETH Zurich, University of ZurichVerified email at fgcz.ethz.ch
Franz F. RoosBiostatistician, DSM Nutritional ProductsVerified email at dsm.com
Steve KroonComputer Science Division, Stellenbosch UniversityVerified email at sun.ac.za
Shunsuke InenagaProfessor, Department of Informatics, Kyushu UniversityVerified email at inf.kyushu-u.ac.jp
Thomas ErlebachProfessor, Department of Computer Science, Durham UniversityVerified email at durham.ac.uk
Romeo RizziProfessore Associato di Ricerca Operativa, Verona UniversityVerified email at univr.it

Zsuzsanna Lipták

Associate Professor, University of Verona

Verified email at univr.it - Homepage

algorithmic bioinformatics string algorithms


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SIRIUS: decomposing isotope patterns for metabolite identification S Böcker, MC Letzel, Z Lipták, A Pervukhin Bioinformatics 25 (2), 218-224, 2009	373	2009
AUDENS: a tool for automated peptide de novo sequencing J Grossmann, FF Roos, M Cieliebak, Z Lipták, LK Mathis, M Müller, ... Journal of proteome research 4 (5), 1768-1774, 2005	111*	2005
Algorithms for jumbled pattern matching in strings P Burcsi, F Cicalese, G Fici, Z Lipták International Journal of Foundations of Computer Science 23 (02), 357-374, 2012	90	2012
A fast and simple algorithm for the Money Changing Problem S Bocker, Z Lipták Algorithmica 48 (4), 413-432, 2007	87	2007
Searching for jumbled patterns in strings F Cicalese, G Fici, Z Lipták Proceedings of the Prague Stringology Conference 2009, 105-117, 2009	61	2009
On approximate jumbled pattern matching in strings P Burcsi, F Cicalese, G Fici, Z Lipták Theory of Computing Systems 50, 35-51, 2012	55	2012
An overview of the wcd EST clustering tool S Hazelhurst, W Hide, Z Lipták, R Nogueira, R Starfield Bioinformatics 24 (13), 1542-1546, 2008	52	2008
On table arrangements, scrabble freaks, and jumbled pattern matching P Burcsi, F Cicalese, G Fici, Z Lipták Fun with Algorithms: 5th International Conference, FUN 2010, Ischia, Italy …, 2010	46	2010
Decomposing metabolomic isotope patterns S Böcker, MC Letzel, Z Lipták, A Pervukhin Algorithms in Bioinformatics: 6th International Workshop, WABI 2006, Zurich …, 2006	44	2006
The Money Changing Problem Revisited: Computing the Frobenius Number in Time O(ka₁) S Böcker, Z Lipták International Computing and Combinatorics Conference, 965-974, 2005	42	2005
Binary jumbled string matching for highly run-length compressible texts G Badkobeh, G Fici, S Kroon, Z Lipták Information Processing Letters 113 (17), 604-608, 2013	34*	2013
Algorithmic complexity of protein identification: Combinatorics of weighted strings M Cieliebak, T Erlebach, Z Lipták, J Stoye, E Welzl Discrete Applied Mathematics 137 (1), 27-46, 2004	32	2004
Decomp—from interpreting Mass Spectrometry peaks to solving the Money Changing Problem S Böcker, Z Lipták, M Martin, A Pervukhin, H Sudek Bioinformatics 24 (4), 591-593, 2008	30	2008
On prefix normal words G Fici, Z Lipták Developments in Language Theory: 15th International Conference, DLT 2011 …, 2011	29	2011
Efficient mass decomposition S Böcker, Z Lipták Proceedings of the 2005 ACM symposium on Applied computing, 151-157, 2005	28	2005
KABOOM! A new suffix array based algorithm for clustering expression data S Hazelhurst, Z Lipták Bioinformatics 27 (24), 3348-3355, 2011	27	2011
Computing the original eBWT faster, simpler, and with less memory C Boucher, D Cenzato, Z Lipták, M Rossi, M Sciortino International Symposium on String Processing and Information Retrieval, 129-142, 2021	26	2021
Novel results on the number of runs of the Burrows-Wheeler-Transform S Giuliani, S Inenaga, Z Lipták, N Prezza, M Sciortino, A Toffanello SOFSEM 2021: Theory and Practice of Computer Science: 47th International …, 2021	26	2021
On prefix normal words and prefix normal forms P Burcsi, G Fici, Z Lipták, F Ruskey, J Sawada Theoretical Computer Science 659, 1-13, 2017	23	2017
On the number of closed factors in a word G Badkobeh, G Fici, Z Lipták Language and Automata Theory and Applications: 9th International Conference …, 2015	21	2015

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