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Joseph F. Walker
Joseph F. Walker
University of Illinois Chicago
Verified email at umich.edu - Homepage
Title
Cited by
Cited by
Year
Phyx: phylogenetic tools for unix
JW Brown*, JF Walker*, SA Smith
Bioinformatics 33 (12), 1886-1888, 2017
2062017
So many genes, so little time: A practical approach to divergence-time estimation in the genomic era
SA Smith, JW Brown, JF Walker
PloS one 13 (5), e0197433, 2018
1872018
Quartet Sampling distinguishes lack of support from conflicting support in the green plant tree of life
JB Pease, JW Brown, JF Walker, CE Hinchliff, SA Smith
American journal of botany 105 (3), 385-403, 2018
1732018
From cacti to carnivores: Improved phylotranscriptomic sampling and hierarchical homology inference provide further insight into the evolution of Caryophyllales
JF Walker, Y Yang, T Feng, A Timoneda, J Mikenas, V Hutchison, ...
American journal of botany 105 (3), 446-462, 2018
942018
Characterizing gene tree conflict in plastome-inferred phylogenies
JF Walker*, N Walker-Hale*, OM Vargas, DA Larson, GW Stull
PeerJ 7, e7747, 2019
932019
Comparative analysis of complete chloroplast genome sequence and inversion variation in Lasthenia burkei (Madieae, Asteraceae)
JF Walker, MJ Zanis, NC Emery
American journal of botany 101 (4), 722-729, 2014
932014
Improved transcriptome sampling pinpoints 26 ancient and more recent polyploidy events in Caryophyllales, including two allopolyploidy events
Y Yang, MJ Moore, SF Brockington, J Mikenas, J Olivieri, JF Walker, ...
new phytologist 217 (2), 855-870, 2018
912018
Analyzing contentious relationships and outlier genes in phylogenomics
JF Walker, JW Brown, SA Smith
Systematic biology, 2018
732018
Disparity, diversity, and duplications in the Caryophyllales
SA Smith, JW Brown, Y Yang, R Bruenn, CP Drummond, SF Brockington, ...
New Phytologist 217 (2), 836-854, 2018
672018
Sources of inversion variation in the small single copy (SSC) region of chloroplast genomes
JF Walker, RK Jansen, MJ Zanis, NC Emery
Botanical Society of America, 2015
652015
Widespread paleopolyploidy, gene tree conflict, and recalcitrant relationships among the carnivorous Caryophyllales
JF Walker, Y Yang, MJ Moore, J Mikenas, A Timoneda, SF Brockington, ...
American journal of botany 104 (6), 858-867, 2017
582017
Evolution of Portulacineae marked by gene tree conflict and gene family expansion associated with adaptation to harsh environments
N Wang, Y Yang, MJ Moore, SF Brockington, JF Walker, JW Brown, ...
Molecular biology and evolution 36 (1), 112-126, 2019
562019
Phylogenetic conflicts, combinability, and deep phylogenomics in plants
SA Smith, N Walker-Hale, JF Walker, JW Brown
Systematic Biology 69 (3), 579-592, 2020
542020
Py PHLAWD: A python tool for phylogenetic dataset construction
SA Smith, JF Walker
Methods in Ecology and Evolution 10 (1), 104-108, 2019
512019
A consensus phylogenomic approach highlights paleopolyploid and rapid radiation in the history of Ericales
DA Larson, JF Walker, OM Vargas, SA Smith
American journal of botany 107 (5), 773-789, 2020
432020
Monocotyledonous plants graft at the embryonic root–shoot interface
G Reeves, A Tripathi, P Singh, MRW Jones, AK Nanda, C Musseau, ...
Nature 602 (7896), 280-286, 2022
372022
Spalt expression and the development of melanic color patterns in pierid butterflies
AM Stoehr, JF Walker, A Monteiro
EvoDevo 4, 1-11, 2013
342013
An efficient field and laboratory workflow for plant phylotranscriptomic projects
Y Yang, MJ Moore, SF Brockington, A Timoneda, T Feng, HE Marx, ...
Applications in Plant Sciences 5 (3), 1600128, 2017
232017
Transcription factors evolve faster than their structural gene targets in the flavonoid pigment pathway
LC Wheeler*, JF Walker*, J Ng, R Deanna, A Dunbar-Wallis, A Backes, ...
Molecular biology and evolution 39 (3), msac044, 2022
212022
Grow Where You Thrive, or Where Only You Can Survive? An Analysis of Performance Curve Evolution in a Clade with Diverse Habitat Affinities
SB Tittes, JF Walker, L Torres-Martínez, NC Emery
The American Naturalist 193 (4), 530-544, 2019
212019
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Articles 1–20