Phylogenomics reveals multiple losses of nitrogen-fixing root nodule symbiosis M Griesmann, Y Chang, X Liu, Y Song, G Haberer, MB Crook, ... Science 361 (6398), eaat1743, 2018 | 351 | 2018 |
Candidatus Frankia Datiscae Dg1, the Actinobacterial Microsymbiont of Datisca glomerata, Expresses the Canonical nod Genes nodABC in Symbiosis with Its … T Persson, K Battenberg, IV Demina, T Vigil-Stenman, B Vanden Heuvel, ... PloS one 10 (5), e0127630, 2015 | 102 | 2015 |
An assemblage of Frankia Cluster II strains from California contains the canonical nod genes and also the sulfotransferase gene nodH TV Nguyen, D Wibberg, K Battenberg, J Blom, B Vanden Heuvel, ... BMC genomics 17, 1-17, 2016 | 64 | 2016 |
Frankia-Enriched Metagenomes from the Earliest Diverging Symbiotic Frankia Cluster: They Come in Teams TV Nguyen, D Wibberg, T Vigil-Stenman, F Berckx, K Battenberg, ... Genome biology and evolution 11 (8), 2273-2291, 2019 | 36 | 2019 |
Distinctive patterns of flavonoid biosynthesis in roots and nodules of Datisca glomerata and Medicago spp. revealed by metabolomic and gene expression profiles I Gifford, K Battenberg, A Vaniya, A Wilson, L Tian, O Fiehn, AM Berry Frontiers in plant science 9, 394650, 2018 | 35 | 2018 |
Proposal of 'Candidatus Frankia californiensis', the uncultured symbiont in nitrogen-fixing root nodules of a phylogenetically broad group of hosts endemic to … P Normand, TV Nguyen, K Battenberg, AM Berry, BV Heuvel, ... International journal of systematic and evolutionary microbiology 67 (10 …, 2017 | 25 | 2017 |
Phylogenomics reveals multiple losses of nitrogen-fixing root nodule symbiosis. Science 361: eaat1743 M Griesmann, Y Chang, X Liu, Y Song, G Haberer, MB Crook, ... | 20 | 2018 |
Comparative Transcriptomic analysis of two actinorhizal plants and the legume medicagotruncatula supports the homology of root nodule symbioses and is congruent with a two-step … K Battenberg, D Potter, CA Tabuloc, JC Chiu, AM Berry Frontiers in plant science 9, 356066, 2018 | 19 | 2018 |
Comparative analysis of the nodule transcriptomes of Ceanothus thyrsiflorus (Rhamnaceae, Rosales) and Datisca glomerata (Datiscaceae, Cucurbitales) MG Salgado, R van Velzen, TV Nguyen, K Battenberg, AM Berry, ... Frontiers in Plant Science 9, 413274, 2018 | 17 | 2018 |
The influence of the host plant is the major ecological determinant of the presence of nitrogen-fixing root nodule symbiont cluster II Frankia species in soil K Battenberg, JA Wren, J Hillman, J Edwards, L Huang, AM Berry Applied and environmental microbiology 83 (1), e02661-16, 2017 | 16 | 2017 |
A flexible cross-platform single-cell data processing pipeline K Battenberg, ST Kelly, RA Ras, NA Hetherington, M Hayashi, A Minoda Nature Communications 13 (1), 6847, 2022 | 9 | 2022 |
OrthoReD: a rapid and accurate orthology prediction tool with low computational requirement K Battenberg, EK Lee, JC Chiu, AM Berry, D Potter BMC bioinformatics 18, 1-12, 2017 | 6 | 2017 |
Comparative phylogenomics and phylotranscriptomics provide insights into the genetic complexity of nitrogen-fixing root-nodule symbiosis Y Zhang, Y Fu, W Xian, X Li, Y Feng, F Bu, Y Shi, S Chen, R van Velzen, ... Plant Communications 5 (1), 2024 | 5 | 2024 |
NDR1/HIN1-Like Protein 13 Interacts with Symbiotic Receptor Kinases and Regulates Nodulation in Lotus japonicus A Yamazaki, K Battenberg, Y Shimoda, M Hayashi Molecular Plant-Microbe Interactions 35 (9), 845-856, 2022 | 2 | 2022 |
Evolution of root nodule symbiosis: Focusing on the transcriptional regulation from the genomic point of view K Battenberg, M Hayashi Plant Biotechnology 39 (1), 79-83, 2022 | 2 | 2022 |
Gene losses resulting in specialized metabolism in the earliest divergent symbiotic Frankia clade can be linked to its low saprotrophic capabilities F Berckx, T Van Nguyen, R Hilker, D Wibberg, K Battenberg, J Kalinowski, ... bioRxiv, 2022.05. 25.493452, 2022 | | 2022 |
UniverSC: a flexible cross-platform single-cell data processing pipeline ST Kelly, K Battenberg, NA Hetherington, M Hayashi, A Minoda bioRxiv, 2021.01. 19.427209, 2021 | | 2021 |
Genome reduction in the earliest divergent Frankia clade is responsible for its low saprotrophic capabilities F Berckx, TV Nguyen, R Hilker, D Wibberg, K Battenberg, A Berry, ... | | 2021 |
Distinctive Patterns of Flavonoid Biosynthesis in Roots and Nodules of Datisca glomerata I Gifford, K Battenberg, A Vaniya | | 2018 |
Comparative Transcriptomic Analysis of Two Actinorhizal Plants and the Legume K Battenberg, D Potter, CA Tabuloc | | 2018 |