Anders Gorm Pedersen

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Søren BrunakProfessor of Disease Systems Biology, University of CopenhagenVerified email at cpr.ku.dk
Pierre BaldiProfessor, University of California, IrvineVerified email at ics.uci.edu
Yves ChauvinHead of Climate Intelligence, TensorielVerified email at tensoriel.com
Lars LarsenProfessor UCPHVerified email at sund.ku.dk
Thor Grundtvig TheanderProfessor, University of CopenhagenVerified email at sund.ku.dk
Ole LundTechnical University of DenmarkVerified email at dtu.dk
Ulrik FahnøeAssistant professorVerified email at sund.ku.dk
Rasmus WernerssonExternal Associate Professor, Technical University of DenmarkVerified email at cbs.dtu.dk
Yves MoreauUniversity of LeuvenVerified email at esat.kuleuven.be
Niels TommerupProfessor in Medical Genetics, University of CopenhagenVerified email at sund.ku.dk
Zeynep TumerClinical Professor, Applied Human Genetics, Kennedy CenterVerified email at regionh.dk
Thomas LavstsenAssociate Professor, Copenhagen UniversityVerified email at sund.ku.dk
Jesper Eugen-OlsenCSO, ViroGates, DenmarkVerified email at virogates.com
Professor Hans BisgaardCopenhagen Prospective Studies of Asthma in Childhood, University of CopenhagenVerified email at copsac.com
Jakob StokholmCOPSAC & Department of Food, University of CopenhagenVerified email at dbac.dk
Morten Arendt RasmussenUniversity of Copenhagen, Dept Food Science and COPSACVerified email at dbac.dk
Jonathan ThorsenMD PhD; Senior Researcher, COPSAC - Copenhagen Prospective Studies on Asthma in Childhood, DenmarkVerified email at dbac.dk
Barth F. SmetsProfessor of Environmental Microbiology, Technical University DenmarkVerified email at env.dtu.dk
Arnaud DechesneSenior Researcher, Technical University of DenmarkVerified email at env.dtu.dk
Alejandro PalomoResearch Assistant Professor, Southern University of Science and TechnologyVerified email at sustech.edu.cn

Anders Gorm Pedersen

Professor, Dept. of Health Technology, Section for Bioinformatics, Technical Univ. of Denmark

Verified email at dtu.dk

Molecular Evolution Phylogenetics Bioinformatics Bayesian statistics


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Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes HB Nielsen, M Almeida, AS Juncker, S Rasmussen, J Li, S Sunagawa, ... Nature biotechnology 32 (8), 822-828, 2014	1067	2014
A human phenome-interactome network of protein complexes implicated in genetic disorders K Lage, EO Karlberg, ZM Størling, PI Olason, AG Pedersen, O Rigina, ... Nature biotechnology 25 (3), 309-316, 2007	1066	2007
Early divergent strains of Yersinia pestis in Eurasia 5,000 years ago S Rasmussen, ME Allentoft, K Nielsen, L Orlando, M Sikora, KG Sjögren, ... Cell 163 (3), 571-582, 2015	620	2015
RevTrans: multiple alignment of coding DNA from aligned amino acid sequences R Wernersson, AG Pedersen Nucleic acids research 31 (13), 3537-3539, 2003	565	2003
Fish Oil–Derived Fatty Acids in Pregnancy and Wheeze and Asthma in Offspring H Bisgaard, J Stokholm, BL Chawes, NH Vissing, E Bjarnadóttir, ... New England Journal of Medicine 375 (26), 2530-2539, 2016	456	2016
137 ancient human genomes from across the Eurasian steppes P de Barros Damgaard, N Marchi, S Rasmussen, M Peyrot, G Renaud, ... Nature 557 (7705), 369-374, 2018	443	2018
Plasmodium falciparum erythrocyte membrane protein 1 diversity in seven genomes–divide and conquer TS Rask, DA Hansen, TG Theander, AG Pedersen, T Lavstsen PLoS Comput Biol 6 (9), e1000933, 2010	425	2010
Neural network prediction of translation initiation sites in eukaryotes: perspectives for EST and genome analysis. AG Pedersen, H Nielsen Ismb 5, 226-233, 1997	397	1997
Definition of supertypes for HLA molecules using clustering of specificity matrices O Lund, M Nielsen, C Kesmir, AG Petersen, C Lundegaard, P Worning, ... Immunogenetics 55 (12), 797-810, 2004	348	2004
The biology of eukaryotic promoter prediction—a review AG Pedersen, P Baldi, Y Chauvin, S Brunak Computers & chemistry 23 (3), 191-207, 1999	331	1999
Comparative genomics sheds light on niche differentiation and the evolutionary history of comammox Nitrospira A Palomo, AG Pedersen, SJ Fowler, A Dechesne, T Sicheritz-Pontén, ... The ISME journal 12 (7), 1779-1793, 2018	272	2018
A DNA structural atlas for Escherichia coli AG Pedersen, LJ Jensen, S Brunak, HH Stærfeldt, DW Ussery Journal of molecular biology 299 (4), 907-930, 2000	267	2000
MaxAlign: maximizing usable data in an alignment R Gouveia-Oliveira, PW Sackett, AG Pedersen BMC bioinformatics 8 (1), 312, 2007	122	2007
Identification of Tn5397-like and Tn916-like transposons and diversity of the tetracycline resistance gene tet (M) in enterococci from humans, pigs and poultry Y Agersø, AG Pedersen, FM Aarestrup Journal of Antimicrobial Chemotherapy 57 (5), 832-839, 2006	121	2006
Epitope mapping and topographic analysis of VAR2CSA DBL3X involved in P. falciparum placental sequestration M Dahlbäck, TS Rask, PH Andersen, MA Nielsen, NT Ndam, M Resende, ... PLoS Pathog 2 (11), e124, 2006	114	2006
DNA structure in human RNA polymerase II promoters AG Pedersen, P Baldi, Y Chauvin, S Brunak Journal of molecular biology 281 (4), 663-673, 1998	111	1998
Characterization of prokaryotic and eukaryotic promoters using hidden Markov models. AG Pedersen, P Baldi, S Brunak, Y Chauvin Ismb 4, 182-191, 1996	103	1996
Protein evolution is faster outside the cell K Julenius, AG Pedersen Molecular biology and evolution 23 (11), 2039-2048, 2006	95	2006
Characterization of the enhancer and promoter landscape of inflammatory bowel disease from human colon biopsies. M Boyd, M Thodberg, M Vitezic, J Bornholdt, K Vitting-Seerup, Y Chen, ... Nature communications 9 (1), 1661-1661, 2018	88	2018
Finding coevolving amino acid residues using row and column weighting of mutual information and multi-dimensional amino acid representation R Gouveia-Oliveira, AG Pedersen Algorithms for Molecular Biology 2 (1), 12, 2007	83	2007

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