Giulio Caravagna
Titolo
Citata da
Citata da
Anno
Detecting repeated cancer evolution from multi-region tumor sequencing data
G Caravagna, Y Giarratano, D Ramazzotti, I Tomlinson, TA Graham, ...
Nature methods 15 (9), 707-714, 2018
612018
Tumour suppression by immune system through stochastic oscillations
G Caravagna, A d’Onofrio, P Milazzo, R Barbuti
Journal of theoretical biology 265 (3), 336-345, 2010
58*2010
CAPRI: efficient inference of cancer progression models from cross-sectional data
D Ramazzotti, G Caravagna, L Olde Loohuis, A Graudenzi, I Korsunsky, ...
Bioinformatics 31 (18), 3016-3026, 2015
572015
Algorithmic methods to infer the evolutionary trajectories in cancer progression
G Caravagna, A Graudenzi, D Ramazzotti, R Sanz-Pamplona, L De Sano, ...
PNAS 113 (28), E4025–E4034, 2016
532016
Inferring tree causal models of cancer progression with probability raising
LO Loohuis, G Caravagna, A Graudenzi, D Ramazzotti, G Mauri, ...
PloS one 9 (10), e108358, 2014
482014
The calculus of looping sequences
R Barbuti, G Caravagna, A Maggiolo–Schettini, P Milazzo, G Pardini
International School on Formal Methods for the Design of Computer …, 2008
452008
The interplay of intrinsic and extrinsic bounded noises in biomolecular networks
G Caravagna, G Mauri, A d'Onofrio
PLoS One 8 (2), e51174, 2013
442013
Delay stochastic simulation of biological systems: a purely delayed approach
R Barbuti, G Caravagna, A Maggiolo-Schettini, P Milazzo
Transactions on computational systems biology XIII, 61-84, 2011
262011
TRONCO: an R package for the inference of cancer progression models from heterogeneous genomic data
L De Sano, G Caravagna, D Ramazzotti, A Graudenzi, G Mauri, B Mishra, ...
Bioinformatics 32 (12), 1911-1913, 2016
242016
Investigating the relation between stochastic differentiation, homeostasis and clonal expansion in intestinal crypts via multiscale modeling
A Graudenzi, G Caravagna, G De Matteis, M Antoniotti
PLoS One 9 (5), e97272, 2014
24*2014
Bio-PEPAd: a non-Markovian extension of Bio-PEPA
G Caravagna, J Hillston
Theoretical Computer Science 419, 26-49, 2012
212012
Formal modeling and simulation of biological systems with delays
G Caravagna
Universita di Pisa, 2011
192011
Evolutionary dynamics of residual disease in human glioblastoma
I Spiteri, G Caravagna, GD Cresswell, A Vatsiou, D Nichol, A Acar, ...
Annals of Oncology 30 (3), 456-463, 2019
182019
Fine-tuning anti-tumor immunotherapies via stochastic simulations
G Caravagna, R Barbuti, A d'Onofrio
BMC bioinformatics 13 (S4), S8, 2012
172012
CABeRNET: a Cytoscape app for augmented Boolean models of gene regulatory NETworks
A Paroni, A Graudenzi, G Caravagna, C Damiani, G Mauri, M Antoniotti
Bmc Bioinformatics 17 (1), 1-12, 2016
162016
Spatially constrained tumour growth affects the patterns of clonal selection and neutral drift in cancer genomic data
K Chkhaidze, T Heide, B Werner, MJ Williams, W Huang, G Caravagna, ...
PLoS computational biology 15 (7), e1007243, 2019
152019
Bounded noises as a natural tool to model extrinsic fluctuations in biomolecular networks
S De Franciscis, G Caravagna, A d’Onofrio
Natural Computing 13 (3), 297-307, 2014
152014
Modeling cumulative biological phenomena with suppes-bayes causal networks
D Ramazzotti, A Graudenzi, G Caravagna, M Antoniotti
Evolutionary Bioinformatics 14, 1176934318785167, 2018
132018
Lazy security controllers
G Caravagna, G Costa, G Pardini
International Workshop on Security and Trust Management, 33-48, 2012
132012
On the interpretation of delays in delay stochastic simulation of biological systems
R Barbuti, G Caravagna, P Milazzo, A Maggiolo-Schettini
arXiv preprint arXiv:0910.1219, 2009
132009
Il sistema al momento non può eseguire l'operazione. Riprova più tardi.
Articoli 1–20