Giulio Caravagna

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Alex GraudenziDept. of Informatics, Systems and Communication, Univ. of Milan-BicoccaEmail verificata su unimib.it
Marco AntoniottiProfessor of Computer Science, Università degli Studi di Milano-BicoccaEmail verificata su unimib.it
Daniele RamazzottiDepartment of Medicine and Surgery, University of Milano-Bicocca, Milano, ItalyEmail verificata su unimib.it
Andrea SottorivaHuman TechnopoleEmail verificata su fht.org
Trevor A GrahamDirector, Centre for Evolution and Cancer, ICR, LondonEmail verificata su icr.ac.uk
Alberto d'OnofrioComputer Sciences for Complex Systems Lab, Università di TriesteEmail verificata su units.it
Bud MishraProfessor of Computer Science and MathematicsEmail verificata su nyu.edu
Benjamin WernerReader, Barts Cancer Institute, Queen Mary University LondonEmail verificata su qmul.ac.uk
Dr George D CresswellSt. Anna Children's Cancer Research InstituteEmail verificata su ccri.at
Guido SanguinettiReader in Informatics, University of EdinburghEmail verificata su inf.ed.ac.uk
Ahmet AcarMiddle East Technical UniversityEmail verificata su metu.edu.tr
Salvatore MiliteHuman TechnopoleEmail verificata su fht.org
Marc J WilliamsMemorial Sloan Kettering Cancer CenterEmail verificata su mskcc.org
William CrossResearcher, Lecturer, University of ReadingEmail verificata su reading.ac.uk
Luis ZapataTeam Leader, Center For Evolution And Cancer, ICREmail verificata su icr.ac.uk
Eszter LakatosAssistant Professor, Chalmers University of TechnologyEmail verificata su chalmers.se
Chris P BarnesUniversity College LondonEmail verificata su ucl.ac.uk
Jacob HousehamData Science Team, The Institute of Cancer ResearchEmail verificata su icr.ac.uk
Nicola CalonaciPost-doc @ Cancer Data Science Lab, Università di TriesteEmail verificata su sissa.it
Javier Fernández-MateosPDTF University of Oviedo, SpainEmail verificata su uniovi.es

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Giulio Caravagna

Cancer Data Science Laboratory, University of Trieste

Email verificata su units.it - Home page

Cancer Data Science Cancer Evolution Bioinformatics Computational Biology


Titolo Ordina per citazioni Ordina per anno Ordina per titolo	Citata da Citata da	Anno
Detecting repeated cancer evolution from multi-region tumor sequencing data G Caravagna, Y Giarratano, D Ramazzotti, I Tomlinson, TA Graham, ... Nature methods 15 (9), 707-714, 2018	179	2018
Subclonal reconstruction of tumors by using machine learning and population genetics G Caravagna, T Heide, MJ Williams, L Zapata, D Nichol, K Chkhaidze, ... Nature genetics 52 (9), 898-907, 2020	116	2020
Phenotypic plasticity and genetic control in colorectal cancer evolution J Househam, T Heide, GD Cresswell, I Spiteri, C Kimberley, L Zapata, ... Nature 611 (7937), 744-753, 2022	108	2022
Exploiting evolutionary steering to induce collateral drug sensitivity in cancer A Acar, D Nichol, J Fernandez-Mateos, GD Cresswell, I Barozzi, SP Hong, ... Nature communications 11 (1), 1923, 2020	105	2020
CAPRI: efficient inference of cancer progression models from cross-sectional data D Ramazzotti, G Caravagna, L Olde Loohuis, A Graudenzi, I Korsunsky, ... Bioinformatics 31 (18), 3016-3026, 2015	105	2015
Algorithmic methods to infer the evolutionary trajectories in cancer progression G Caravagna, A Graudenzi, D Ramazzotti, R Sanz-Pamplona, L De Sano, ... PNAS 113 (28), E4025–E4034, 2016	95	2016
Chromatin Velocity reveals epigenetic dynamics by single-cell profiling of heterochromatin and euchromatin M Tedesco, F Giannese, D Lazarević, V Giansanti, D Rosano, S Monzani, ... Nature biotechnology 40 (2), 235-244, 2022	87	2022
The co-evolution of the genome and epigenome in colorectal cancer T Heide, J Househam, GD Cresswell, I Spiteri, C Lynn, M Mossner, ... Nature 611 (7937), 733-743, 2022	81	2022
Spatially constrained tumour growth affects the patterns of clonal selection and neutral drift in cancer genomic data K Chkhaidze, T Heide, B Werner, MJ Williams, W Huang, G Caravagna, ... PLoS computational biology 15 (7), e1007243, 2019	77	2019
Inferring tree causal models of cancer progression with probability raising LO Loohuis, G Caravagna, A Graudenzi, D Ramazzotti, G Mauri, ... PloS one 9 (10), e108358, 2014	76	2014
Evolutionary dynamics of residual disease in human glioblastoma I Spiteri, G Caravagna, GD Cresswell, A Vatsiou, D Nichol, A Acar, ... Annals of Oncology 30 (3), 456-463, 2019	75	2019
Tumour suppression by immune system through stochastic oscillations G Caravagna, A d’Onofrio, P Milazzo, R Barbuti Journal of theoretical biology 265 (3), 336-345, 2010	72*	2010
Signatures of TOP1 transcription-associated mutagenesis in cancer and germline MAM Reijns, DA Parry, TC Williams, F Nadeu, RL Hindshaw, ... Nature, 2022	51	2022
The interplay of intrinsic and extrinsic bounded noises in biomolecular networks G Caravagna, G Mauri, A d'Onofrio PLoS One 8 (2), e51174, 2013	49	2013
TRONCO: an R package for the inference of cancer progression models from heterogeneous genomic data L De Sano, G Caravagna, D Ramazzotti, A Graudenzi, G Mauri, B Mishra, ... Bioinformatics 32 (12), 1911-1913, 2016	48	2016
The calculus of looping sequences R Barbuti, G Caravagna, A Maggiolo–Schettini, P Milazzo, G Pardini Formal Methods for Computational Systems Biology: 8th International School …, 2008	48	2008
Germline MBD4 deficiency causes a multi-tumor predisposition syndrome C Palles, HD West, E Chew, S Galavotti, C Flensburg, JE Grolleman, ... The American Journal of Human Genetics 109 (5), 953-960, 2022	40	2022
Learning mutational graphs of individual tumour evolution from single-cell and multi-region sequencing data D Ramazzotti, A Graudenzi, L De Sano, M Antoniotti, G Caravagna BMC bioinformatics 20, 1-13, 2019	39	2019
Immune selection determines tumor antigenicity and influences response to checkpoint inhibitors L Zapata, G Caravagna, MJ Williams, E Lakatos, K AbdulJabbar, ... Nature Genetics 55 (3), 451-460, 2023	38	2023
Reply to ‘Neutral tumor evolution?’ T Heide, L Zapata, MJ Williams, B Werner, G Caravagna, CP Barnes, ... Nature genetics 50 (12), 1633-1637, 2018	32	2018

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