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Rıza Özçelik
Rıza Özçelik
Ph.D. Candidate, Biomedical Engineering, Eindhoven University of Technology
Verified email at tue.nl - Homepage
Title
Cited by
Cited by
Year
Chemboost: A chemical language based approach for protein–ligand binding affinity prediction
R Özçelik, H Öztürk, A Özgür, E Ozkirimli
Molecular Informatics 40 (5), 2000212, 2021
29*2021
Data and representation for Turkish natural language inference
E Budur, R Özçelik, T Güngör, C Potts
arXiv preprint arXiv:2004.14963, 2020
292020
Structure‐Based Drug Discovery with Deep Learning
R Özçelik, D van Tilborg, J Jiménez‐Luna, F Grisoni
ChemBioChem 24 (13), e202200776, 2023
152023
Vapur: A Search Engine to Find Related Protein--Compound Pairs in COVID-19 Literature
A Köksal, H Dönmez, R Özçelik, E Ozkirimli, A Özgür
Proceedings of the 1st Workshop on NLP for COVID-19 (Part 2) at EMNLP 2020, 2020
152020
User interface for Turkish word network KeNet
R Özçelik, G Uludoğan, S Parlar, Ö Bakay, Ö Ergelen, OT Yıldız
2019 27th Signal Processing and Communications Applications Conference (SIU …, 2019
112019
Structure-based drug discovery with deep learning
R Özçelik, D van Tilborg, J Jiménez-Luna, F Grisoni
arXiv preprint arXiv:2212.13295, 2022
42022
A Framework for Improving the Generalizability of Drug–Target Affinity Prediction Models
R Özçelik, A Bağ, B Atil, Mİ Barsbey, A ÖZgür, E Ozkirimli
Journal of Computational Biology 30 (11), 1226-1239, 2023
3*2023
Deep learning for low-data drug discovery: hurdles and opportunities
D van Tilborg, H Brinkmann, E Criscuolo, L Rossen, R Özçelik, F Grisoni
12024
A Computational Software for Training Robust Drug–Target Affinity Prediction Models: pydebiaseddta
M Barsbey, R Özçelik, A Bağ, B Atil, A ÖZgür, E Ozkirimli
Journal of Computational Biology 30 (11), 1240-1245, 2023
12023
Chemical Language Modeling with Structured State Spaces
R Özçelik, S de Ruiter, E Criscuolo, F Grisoni
2024
Exploring data‐driven chemical SMILES tokenization approaches to identify key protein–ligand binding moieties
AB Temizer, G Uludoğan, R Özçelik, T Koulani, E Ozkirimli, KO Ulgen, ...
Molecular Informatics, e202300249, 2024
2024
Building Efficient and Effective OpenQA Systems for Low-Resource Languages
E Budur, R Özçelik, D Soylu, O Khattab, T Güngör, C Potts
arXiv preprint arXiv:2401.03590, 2024
2024
Biomolecular language processing for drug-target affinity prediction
R Özçelik
Thesis (MS)-Bogazici University. Institute for Graduate Studies in Science …, 2022
2022
Türkçe Dogal DilIsleme için Arayüzler User Interfaces for Turkish Natural Language Processing
G Uludogan, R Özçelik, S Parlar, G Ercan, OT Yıldız
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Articles 1–14