Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers RK Varshney, W Chen, Y Li, AK Bharti, RK Saxena, JA Schlueter, ... Nature biotechnology 30 (1), 83-89, 2012 | 954 | 2012 |
MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs J Zhai, DH Jeong, E De Paoli, S Park, BD Rosen, Y Li, AJ González, ... Genes & development 25 (23), 2540-2553, 2011 | 742 | 2011 |
Current state-of-art of sequencing technologies for plant genomics research M Thudi, Y Li, SA Jackson, GD May, RK Varshney Briefings in Functional Genomics 11 (1), 3-11, 2012 | 182 | 2012 |
Regional heterogeneity in gene expression, regulation, and coherence in the frontal cortex and hippocampus across development and schizophrenia L Collado-Torres, EE Burke, A Peterson, JH Shin, RE Straub, A Rajpurohit, ... Neuron 103 (2), 203-216. e8, 2019 | 163 | 2019 |
Gene Networks in Plant Biology: Approaches in Reconstruction and Analysis Y Li, SA Pearl, SA Jackson Trends in plant science 20 (10), 664-675, 2015 | 89 | 2015 |
Identification and characterization of functional centromeres of the common bean A Iwata, AL Tek, MMS Richard, B Abernathy, A Fonseca, J Schmutz, ... The Plant Journal 76 (1), 47-60, 2013 | 73 | 2013 |
The soybean (Glycine max) nodulation‐suppressive CLE peptide, GmRIC1, functions interspecifically in common white bean (Phaseolus vulgaris), but not in a supernodulating line … BJ Ferguson, D Li, AH Hastwell, DE Reid, Y Li, SA Jackson, PM Gresshoff Plant biotechnology journal 12 (8), 1085-1097, 2014 | 65 | 2014 |
Fine mapping of Co-x, an anthracnose resistance gene to a highly virulent strain of Colletotrichum lindemuthianum in common bean MMS Richard, S Pflieger, M Sévignac, V Thareau, S Blanchet, Y Li, ... Theoretical and Applied Genetics 127, 1653-1666, 2014 | 65 | 2014 |
Genome-wide RNAseq study of the molecular mechanisms underlying microglia activation in response to pathological tau perturbation in the rTg4510 tau transgenic animal model H Wang, Y Li, JW Ryder, JT Hole, PJ Ebert, DC Airey, HR Qian, ... Molecular neurodegeneration 13, 1-19, 2018 | 56 | 2018 |
Landscape and evolutionary dynamics of terminal repeat retrotransposons in miniature in plant genomes D Gao, Y Li, K Do Kim, B Abernathy, SA Jackson Genome Biology 17 (1), 1-18, 2016 | 52 | 2016 |
Gene Network Reconstruction by Integration of Prior Biological Knowledge Y Li, SA Jackson G3: Genes| Genomes| Genetics 5 (6), 1075-1079, 2015 | 52 | 2015 |
Schizophrenia risk variants influence multiple classes of transcripts of sorting nexin 19 (SNX19) L Ma, SA Semick, Q Chen, C Li, R Tao, AJ Price, JH Shin, Y Jia, ... Molecular psychiatry 25 (4), 831-843, 2020 | 40 | 2020 |
A Bayesian gene network reveals insight into the JAK-STAT pathway in systemic lupus erythematosus Y Li, RE Higgs, RW Hoffman, ER Dow, X Liu, M Petri, DJ Wallace, ... Plos one 14 (12), e0225651, 2019 | 14 | 2019 |
Crowdsourcing the nodulation gene network discovery environment Y Li, SA Jackson BMC Bioinformatics 17 (1), 223, 2016 | 4 | 2016 |
Towards quality improvement of vaccine concept mappings in the OMOP vocabulary with a semi-automated method Rashmie Abeysinghe, Adam Black, Denys Kaduk, Yupeng Li, Christian Reich ... Journal of Biomedical Informatics 134, 104162, 2022 | 3 | 2022 |
Use digital sensor and deep learning to evaluate motor performance in the D1PAM (LY3154207) phase 1B Parkinson's disease clinical trial Y Li, Y Guan, J Wang, A Calvin, J Kyle, B Miller MOVEMENT DISORDERS 34, S58-S58, 2019 | 2 | 2019 |
Comparison of quantitative trait loci methods: Total expression and allelic imbalance method in brain RNA-seq JR Gådin, A Buil, C Colantuoni, AE Jaffe, J Nielsen, JH Shin, TM Hyde, ... PloS one 14 (6), e0217765, 2019 | 2 | 2019 |
Generic Medical Concept Embedding and Time Decay for Diverse Patient Outcome Prediction Tasks Y Li, W Dong, B Ru, A Black, X Zhang, Y Guan iScience 25 (9), 104880, 2022 | 1 | 2022 |
Prediction of full-length internal ribosome entry sites (IRES) using deep learning Y Li The Fifth Annual RNA Therapeutics: From Concept to Clinic, 2023 | | 2023 |
VIVID - An integrated system to closely monitor and predict emerging and high-risk SARS-CoV-2 variants Y Li, Y Huang, J Zhang The 22nd China Biological Products Annual Conference, 2023 | | 2023 |