Raquel Dias
Title
Cited by
Cited by
Year
Soil pH determines microbial diversity and composition in the park grass experiment
K Zhalnina, R Dias, PD de Quadros, A Davis-Richardson, FAO Camargo, ...
Microbial ecology 69 (2), 395-406, 2015
2302015
Molecular docking algorithms
R Dias, J de Azevedo, F Walter
Current drug targets 9 (12), 1040-1047, 2008
1602008
Bacteroides dorei dominates gut microbiome prior to autoimmunity in Finnish children at high risk for type 1 diabetes
AG Davis-Richardson, AN Ardissone, R Dias, V Simell, MT Leonard, ...
Frontiers in microbiology 5, 678, 2014
1352014
Computational methods for calculation of ligand-binding affinity
J de Azevedo, F Walter, R Dias
Current drug targets 9 (12), 1031-1039, 2008
752008
Genome sequence of Candidatus Nitrososphaera evergladensis from group I. 1b enriched from Everglades soil reveals novel genomic features of the ammonia-oxidizing archaea
KV Zhalnina, R Dias, MT Leonard, PD de Quadros, FAO Camargo, ...
PLos one 9 (7), e101648, 2014
562014
Experimental approaches to evaluate the thermodynamics of protein-drug interactions
J de Azevedo, F Walter, R Dias
Current drug targets 9 (12), 1071-1076, 2008
552008
Genomic targets and features of BarA-UvrY (-SirA) signal transduction systems
TR Zere, CA Vakulskas, Y Leng, A Pannuri, AH Potts, R Dias, D Tang, ...
PLoS One 10 (12), e0145035, 2015
462015
Evaluation of ligand-binding affinity using polynomial empirical scoring functions
WF de Azevedo Jr, R Dias
Bioorganic & medicinal chemistry 16 (20), 9378-9382, 2008
442008
Structural studies of human purine nucleoside phosphorylase: towards a new specific empirical scoring function
LFSM Timmers, RA Caceres, AL Vivan, LM Gava, R Dias, RG Ducati, ...
Archives of biochemistry and biophysics 479 (1), 28-38, 2008
392008
Molecular modeling and dynamics simulations of PNP from Streptococcus agalactiae
RA Caceres, LFS Timmers, R Dias, LA Basso, DS Santos, ...
Bioorganic & medicinal chemistry 16 (9), 4984-4993, 2008
362008
Evaluation of molecular docking using polynomial empirical scoring functions
R Dias, LFS Macedo Timmers, RA Caceres, J de Azevedo, W Filgueira
Current Drug Targets 9 (12), 1062-1070, 2008
352008
De Azevedo Jr., WF (2008)
R Dias, L Timmers, RA Caceres
Curr. Drug Targets 9 (12), 1040-1047, 0
28
Molecular modeling as a tool for drug discovery
GB Barcellos, I Pauli, RA Caceres, LFS Macedo Timmers, R Dias, ...
Current drug targets 9 (12), 1084-1091, 2008
262008
Identification of the genes required for the culture of Liberibacter crescens, the closest cultured relative of the Liberibacter plant pathogens
KK Lai, AG Davis-Richardson, R Dias, EW Triplett
Frontiers in microbiology 7, 547, 2016
252016
Microbial community composition in Brazilian stored diesel fuel of varying sulfur content, using high-throughput sequencing
AO de Azambuja, F Bücker, PD de Quadros, K Zhalnina, R Dias, ...
Fuel 189, 340-349, 2017
182017
Using both qualitative and quantitative data in parameter identification for systems biology models
ED Mitra, R Dias, RG Posner, WS Hlavacek
Nature communications 9 (1), 1-8, 2018
142018
Different combinations of atomic interactions predict protein‐small molecule and protein‐DNA/RNA affinities with similar accuracy
R Dias, B Kolazckowski
Proteins: Structure, Function, and Bioinformatics 83 (11), 2100-2114, 2015
112015
Integrating DNA methylation and gene expression data in the development of the soybean-Bradyrhizobium N2-fixing symbiosis
AG Davis-Richardson, JT Russell, R Dias, AJ McKinlay, R Canepa, ...
Frontiers in microbiology 7, 518, 2016
92016
Molecular modeling, dynamics and docking studies of Purine Nucleoside Phosphorylase from Streptococcus pyogenes
LFSM Timmers, RA Caceres, R Dias, LA Basso, DS Santos, ...
Biophysical chemistry 142 (1-3), 7-16, 2009
92009
Bioinformatics tools for screening of antiparasitic drugs
WF de Azevedo Junior, R Dias, LFS Macedo Timmers, I Pauli, ...
Current drug targets 10 (3), 232-239, 2009
92009
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Articles 1–20