| Eleven grand challenges in single-cell data science D Lähnemann, J Köster, E Szczurek, DJ McCarthy, SC Hicks, ... Genome biology 21, 1-35, 2020 | 951 | 2020 |
| Iron loading is a prominent feature of activated microglia in Alzheimer’s disease patients B Kenkhuis, A Somarakis, L de Haan, O Dzyubachyk, ME IJsselsteijn, ... Acta neuropathologica communications 9, 1-15, 2021 | 99 | 2021 |
| ImaCytE: Visual Exploration of Cellular Micro-Environments for Imaging Mass Cytometry Data A Somarakis, V Van Unen, F Koning, B Lelieveldt, T Höllt IEEE transactions on visualization and computer graphics 27 (1), 98-110, 2019 | 74 | 2019 |
| Co-expression patterns of microglia markers Iba1, TMEM119 and P2RY12 in Alzheimer's disease B Kenkhuis, A Somarakis, LRT Kleindouwel, WMC van Roon-Mom, ... Neurobiology of Disease 167, 105684, 2022 | 60 | 2022 |
| Semi‐automated background removal limits data loss and normalizes imaging mass cytometry data ME Ijsselsteijn, A Somarakis, BPF Lelieveldt, T Höllt, NFCC de Miranda Cytometry Part A 99 (12), 1187-1197, 2021 | 22 | 2021 |
| Tumor-specific T cells support chemokine-driven spatial organization of intratumoral immune microaggregates needed for long survival Z Abdulrahman, SJ Santegoets, G Sturm, P Charoentong, ME Ijsselsteijn, ... Journal for immunotherapy of cancer 10 (2), 2022 | 20 | 2022 |
| Visual cohort comparison for spatial single-cell omics-data A Somarakis, ME Ijsselsteijn, SJ Luk, B Kenkhuis, NFCC de Miranda, ... IEEE Transactions on Visualization and Computer Graphics 27 (2), 733-743, 2021 | 17 | 2021 |
| Early-life compartmentalization of immune cells in human fetal tissues revealed by high-dimensional mass cytometry N Li, V Van Unen, N Guo, T Abdelaal, A Somarakis, J Eggermont, ... Frontiers in immunology 10, 1932, 2019 | 17 | 2019 |
| Immune-based biomarker accurately predicts response to imiquimod immunotherapy in cervical high-grade squamous intraepithelial lesions Z Abdulrahman, N Hendriks, AJ Kruse, A Somarakis, AJM van de Sande, ... Journal for ImmunoTherapy of Cancer 10 (11), 2022 | 5 | 2022 |
| Functional and spatial proteomics profiling reveals intra-and intercellular signaling crosstalk in colorectal cancer C Plattner, G Lamberti, P Blattmann, A Kirchmair, D Rieder, Z Loncova, ... Iscience 26 (12), 2023 | 3 | 2023 |
| VISTA expression on cancer-associated endothelium selectively prevents T-cell extravasation SJ Luk, R Schoppmeyer, ME Ijsselsteijn, A Somarakis, I Acem, ... Cancer immunology research 11 (11), 1480-1492, 2023 | 1 | 2023 |
| IMMUNE-BASED BIOMARKER ACCURATELY PREDICTS RESPONSE TO IMIQUIMOD IMMUNOTHERAPY IN CERVICAL HIGH-GRADE SQUAMOUS INTRAEPITHELIAL LESIONS E Van Esch, Z Abdulrahman, N Hendriks, AJ Kruse, A Somarakis, ... INTERNATIONAL JOURNAL OF GYNECOLOGICAL CANCER 32, A187-A188, 2022 | | 2022 |
| EP330/# 475 Immune-based biomarker accurately predicts response to imiquimod immunotherapy in cervical high-grade squamous intraepithelial lesions E Van Esch, Z Abdulrahman, N Hendriks, AJ Kruse, A Somarakis, ... International Journal of Gynecologic Cancer 32 (Suppl 3), 2022 | | 2022 |
| Visual analytics for spatially resolved omics data at single cell resolution: methods & applications A Somarakis Leiden University, 2022 | | 2022 |
| 35 Chemokine-driven spatial organization of immune cell microaggregates marks oropharyngeal squamous cell carcinomas containing tumor-specific T cells Z Abdulrahman, S Santegoets, G Sturm, P Charoentong, M Ijsselsteijn, ... Journal for Immunotherapy of Cancer 9 (Suppl 2), A41-A41, 2021 | | 2021 |
| Visual Analysis of Tissue Images at Cellular Level. A Somarakis, ME Ijsselsteijn, B Kenkhuis, V van Unen, SJ Luk, F Koning, ... EuroVis (Dirk Bartz Prize), 1-5, 2021 | | 2021 |
| ANALYSIS OF MULTIPLEXED CELLULAR IMAGES IN ALZHEIMER’S STUDY B Kenkhuis, A Somarakis, L de Haan, O Dzyubachyk, ME IJsselsteijn | | |
Thomas HölltAssistant Professor - TU Delft / Leiden University Medical CenterVerified email at tudelft.nl
