| Circular ecDNA promotes accessible chromatin and high oncogene expression S Wu, KM Turner, N Nguyen, R Raviram, M Erb, J Santini, J Luebeck, ... Nature 575 (7784), 699-703, 2019 | 390 | 2019 |
| MicroRNAs from the parasitic plant Cuscuta campestris target host messenger RNAs S Shahid, G Kim, NR Johnson, E Wafula, F Wang, C Coruh, ... Nature 553 (7686), 82-85, 2018 | 336 | 2018 |
| Improved placement of multi-mapping small RNAs NR Johnson, JM Yeoh, C Coruh, MJ Axtell G3: Genes, Genomes, Genetics 6 (7), 2103-2111, 2016 | 246 | 2016 |
| Arabidopsis lyrata Small RNAs: Transient MIRNA and Small Interfering RNA Loci within the Arabidopsis Genus Z Ma, C Coruh, MJ Axtell The Plant Cell 22 (4), 1090-1103, 2010 | 231 | 2010 |
| miR156 and miR390 Regulate tasiRNA Accumulation and Developmental Timing in Physcomitrella patens SH Cho, C Coruh, MJ Axtell The plant cell 24 (12), 4837-4849, 2012 | 160 | 2012 |
| Physcomitrella patens DCL3 is required for 22–24 nt siRNA accumulation, suppression of retrotransposon-derived transcripts, and normal development SH Cho, C Addo-Quaye, C Coruh, MA Arif, Z Ma, W Frank, MJ Axtell PLoS genetics 4 (12), e1000314, 2008 | 85 | 2008 |
| Comprehensive Annotation of Physcomitrella patens Small RNA Loci Reveals That the Heterochromatic Short Interfering RNA Pathway Is Largely Conserved in … C Coruh, SH Cho, S Shahid, Q Liu, A Wierzbicki, MJ Axtell The Plant Cell 27 (8), 2148-2162, 2015 | 61 | 2015 |
| Expression and Cellular Localization of ZIP1 Transporter Under Zinc Deficiency in Wild Emmer Wheat E Durmaz, C Coruh, G Dinler, MA Grusak, Z Peleg, Y Saranga, T Fahima, ... Plant Molecular Biology Reporter 29, 582-596, 2011 | 61 | 2011 |
| AmpliconReconstructor integrates NGS and optical mapping to resolve the complex structures of focal amplifications J Luebeck, C Coruh, SR Dehkordi, JT Lange, KM Turner, V Deshpande, ... Nature communications 11 (1), 4374, 2020 | 60 | 2020 |
| Integrated annotations and analyses of small RNA–producing loci from 47 diverse plants A Lunardon, NR Johnson, E Hagerott, T Phifer, S Polydore, C Coruh, ... Genome Research 30 (3), 497-513, 2020 | 58 | 2020 |
| Targeted profiling of human extrachromosomal DNA by CRISPR-CATCH KL Hung, J Luebeck, SR Dehkordi, CI Colón, R Li, ITL Wong, C Coruh, ... Nature genetics 54 (11), 1746-1754, 2022 | 50 | 2022 |
| Seeing the forest for the trees: annotating small RNA producing genes in plants C Coruh, S Shahid, MJ Axtell Current opinion in plant biology 18, 87-95, 2014 | 50 | 2014 |
| The CLASSY family controls tissue-specific DNA methylation patterns in Arabidopsis M Zhou, C Coruh, G Xu, LM Martins, C Bourbousse, A Lambolez, JA Law Nature communications 13 (1), 244, 2022 | 44 | 2022 |
| Organellar genome analysis of rye (Secale cereale) representing diverse geographic regions Z Isik, I Parmaksiz, C Çoruh, YS Geylan-Su, O Cebeci, B Beecher, ... Genome 50 (8), 724-734, 2007 | 26 | 2007 |
| Genome-wide analysis of single non-templated nucleotides in plant endogenous siRNAs and miRNAs F Wang, NR Johnson, C Coruh, MJ Axtell Nucleic acids research 44 (15), 7395-7405, 2016 | 24 | 2016 |
| Chemoenzymatic labeling of DNA methylation patterns for single-molecule epigenetic mapping T Gabrieli, Y Michaeli, S Avraham, D Torchinsky, S Margalit, L Schütz, ... Nucleic acids research 50 (16), e92-e92, 2022 | 22 | 2022 |
| AmpliconReconstructor: Integrated analysis of NGS and optical mapping resolves the complex structures of focal amplifications in cancer J Luebeck, C Coruh, SR Dehkordi, JT Lange, KM Turner, V Deshpande, ... bioRxiv, 2020.01. 22.916031, 2020 | 3 | 2020 |
| Identification and characterization of a cDNA encoding zip transporter protein in Triticum dicoccoides C Çoruh | 2 | 2007 |
| Plasma cell-free DNA hydroxymethylation profiling reveals anti-PD-1 treatment response and resistance biology in non-small cell lung cancer GD Guler, Y Ning, C Coruh, GP Mognol, T Phillips, M Nabiyouni, K Hazen, ... Journal for Immunotherapy of Cancer 12 (1), 2024 | 1 | 2024 |
| Identification of small RNA producing genes in the moss Physcomitrella patens C Coruh The Pennsylvania State University, 2014 | 1 | 2014 |
