Leena Salmela
Leena Salmela
Email verificata su cs.helsinki.fi - Home page
TitoloCitata daAnno
LoRDEC: accurate and efficient long read error correction
L Salmela, E Rivals
Bioinformatics 30 (24), 3506-3514, 2014
2382014
Correcting errors in short reads by multiple alignments
L Salmela, J Schröder
Bioinformatics 27 (11), 1455-1461, 2011
1732011
The Glanville fritillary genome retains an ancient karyotype and reveals selective chromosomal fusions in Lepidoptera
V Ahola, R Lehtonen, P Somervuo, L Salmela, P Koskinen, P Rastas, ...
Nature communications 5, 4737, 2014
1362014
Correction of sequencing errors in a mixed set of reads
L Salmela
Bioinformatics 26 (10), 1284-1290, 2010
1312010
Multipattern string matching with q-grams
L Salmela, J Tarhio, J Kytöjoki
Journal of Experimental Algorithmics (JEA) 11, 1.1, 2007
1042007
Fast scaffolding with small independent mixed integer programs
L Salmela, V Mäkinen, N Välimäki, J Ylinen, E Ukkonen
Bioinformatics 27 (23), 3259-3265, 2011
832011
Accurate self-correction of errors in long reads using de Bruijn graphs
L Salmela, R Walve, E Rivals, E Ukkonen
Bioinformatics 33 (6), 799-806, 2016
562016
Bit-parallel search algorithms for long patterns
B Ďurian, H Peltola, L Salmela, J Tarhio
International Symposium on Experimental Algorithms, 129-140, 2010
272010
Tuning string matching for huge pattern sets
J Kytöjoki, L Salmela, J Tarhio
Annual Symposium on Combinatorial Pattern Matching, 211-224, 2003
262003
Flight‐induced changes in gene expression in the Glanville fritillary butterfly
J Kvist, ALK Mattila, P Somervuo, V Ahola, P Koskinen, L Paulin, ...
Molecular ecology 24 (19), 4886-4900, 2015
242015
Forbidden patterns
J Fischer, T Gagie, T Kopelowitz, M Lewenstein, V Mäkinen, L Salmela, ...
Latin American Symposium on Theoretical Informatics, 327-337, 2012
242012
Normalized N50 assembly metric using gap-restricted co-linear chaining
V Mäkinen, L Salmela, J Ylinen
BMC bioinformatics 13 (1), 255, 2012
232012
mpscan: Fast Localisation of Multiple Reads in Genomes
E Rivals, L Salmela, P Kiiskinen, P Kalsi, J Tarhio
International Workshop on Algorithms in Bioinformatics, 246-260, 2009
232009
Fast parameterized matching with q-grams
L Salmela, J Tarhio
Journal of Discrete Algorithms 6 (3), 408-419, 2008
212008
Gap filling as exact path length problem
L Salmela, K Sahlin, V Mäkinen, AI Tomescu
Journal of Computational Biology 23 (5), 347-361, 2016
202016
Approximate Boyer-Moore string matching for small alphabets
L Salmela, J Tarhio, P Kalsi
Algorithmica 58 (3), 591-609, 2010
192010
Indexing variable length substrings for exact and approximate matching
G Navarro, L Salmela
International Symposium on String Processing and Information Retrieval, 214-221, 2009
182009
String matching with alphabet sampling
F Claude, G Navarro, H Peltola, L Salmela, J Tarhio
Journal of Discrete Algorithms 11, 37-50, 2012
172012
Sublinear algorithms for parameterized matching
L Salmela, J Tarhio
Annual Symposium on Combinatorial Pattern Matching, 354-364, 2006
102006
ACE: Automated compiler exercises
L Salmela, J Tarhio
Proceedings of the 4th Finnish/Baltic sea conference on computer science …, 2004
92004
Il sistema al momento non può eseguire l'operazione. Riprova più tardi.
Articoli 1–20