Ramya Raviram
Ramya Raviram
UCSD, Ludwig Institute for Cancer Research
Email verificata su ucsd.edu - Home page
TitoloCitata daAnno
CTCF establishes discrete functional chromatin domains at the Hox clusters during differentiation
V Narendra, PP Rocha, D An, R Raviram, JA Skok, EO Mazzoni, ...
Science 347 (6225), 1017-1021, 2015
3052015
Cohesin loss alters adult hematopoietic stem cell homeostasis, leading to myeloproliferative neoplasms
J Mullenders, B Aranda-Orgilles, P Lhoumaud, M Keller, J Pae, K Wang, ...
Journal of Experimental Medicine 212 (11), 1833-1850, 2015
752015
Single-nucleus analysis of accessible chromatin in developing mouse forebrain reveals cell-type-specific transcriptional regulation
S Preissl, R Fang, H Huang, Y Zhao, R Raviram, DU Gorkin, Y Zhang, ...
Nature neuroscience 21 (3), 432, 2018
582018
CRISPR-dCas9 and sgRNA scaffolds enable dual-colour live imaging of satellite sequences and repeat-enriched individual loci
Y Fu, PP Rocha, VM Luo, R Raviram, Y Deng, EO Mazzoni, JA Skok
Nature communications 7, 11707, 2016
542016
Capturing the onset of PRC2-mediated repressive domain formation
O Oksuz, V Narendra, CH Lee, N Descostes, G LeRoy, R Raviram, ...
Molecular cell 70 (6), 1149-1162. e5, 2018
472018
MED12 regulates HSC-specific enhancers independently of mediator kinase activity to control hematopoiesis
B Aranda-Orgilles, R Saldaa-Meyer, E Wang, E Trompouki, A Fassl, ...
Cell stem cell 19 (6), 784-799, 2016
442016
4C-ker: a method to reproducibly identify genome-wide interactions captured by 4C-Seq experiments
R Raviram, PP Rocha, CL Mller, ER Miraldi, S Badri, Y Fu, E Swanzey, ...
PLoS computational biology 12 (3), e1004780, 2016
392016
Long-range regulation of V (D) J recombination
C Proudhon, B Hao, R Raviram, J Chaumeil, JA Skok
Advances in immunology 128, 123-182, 2015
292015
Breaking TADs: insights into hierarchical genome organization
PP Rocha, R Raviram, R Bonneau, JA Skok
Epigenomics 7 (4), 523-526, 2015
272015
Low-grade astrocytoma mutations in IDH1, P53, and ATRX cooperate to block differentiation of human neural stem cells via repression of SOX2
AS Modrek, D Golub, T Khan, D Bready, J Prado, C Bowman, J Deng, ...
Cell reports 21 (5), 1267-1280, 2017
252017
Identification of multi-loci hubs from 4C-seq demonstrates the functional importance of simultaneous interactions
T Jiang, R Raviram, V Snetkova, PP Rocha, C Proudhon, S Badri, ...
Nucleic acids research 44 (18), 8714-8725, 2016
222016
Active and inactive enhancers cooperate to exert localized and long-range control of gene regulation
C Proudhon, V Snetkova, R Raviram, C Lobry, S Badri, T Jiang, B Hao, ...
Cell reports 15 (10), 2159-2169, 2016
172016
Mediator facilitates transcriptional activation and dynamic long-range contacts at the IgH locus during class switch recombination
AS Thomas-Claudepierre, I Robert, PP Rocha, R Raviram, E Schiavo, ...
Journal of Experimental Medicine 213 (3), 303-312, 2016
172016
A damage-independent role for 53BP1 that impacts break order and Igh architecture during class switch recombination
PP Rocha, R Raviram, Y Fu, JH Kim, VM Luo, A Aljoufi, E Swanzey, ...
Cell reports 16 (1), 48-55, 2016
162016
Dynamic reorganization of the genome shapes the recombination landscape in meiotic prophase
L Patel, R Kang, SC Rosenberg, Y Qiu, R Raviram, S Chee, R Hu, B Ren, ...
Nature structural & molecular biology 26 (3), 164, 2019
132019
Transcriptional regulatory control of mammalian nephron progenitors revealed by multi-factor cistromic analysis and genetic studies
LL O’Brien, Q Guo, E Bahrami-Samani, JS Park, SM Hasso, YJ Lee, ...
PLoS genetics 14 (1), e1007181, 2018
92018
Interpreting 4C-Seq data: how far can we go?
R Raviram, PP Rocha, R Bonneau, JA Skok
Epigenomics 6 (5), 455-457, 2014
92014
NAD metabolic dependency in cancer is shaped by gene amplification and enhancer remodelling
S Chowdhry, C Zanca, U Rajkumar, T Koga, Y Diao, R Raviram, F Liu, ...
Nature 569 (7757), 570, 2019
72019
MAPS: Model-based analysis of long-range chromatin interactions from PLAC-seq and HiChIP experiments
I Juric, M Yu, A Abnousi, R Raviram, R Fang, Y Zhao, Y Zhang, Y Qiu, ...
PLoS computational biology 15 (4), e1006982, 2019
52019
High correlation of the response of upper and lower lobe small airway epithelium to smoking
BG Harvey, Y Strulovici-Barel, TL Vincent, JG Mezey, R Raviram, ...
PloS one 8 (9), e72669, 2013
42013
Il sistema al momento non pu eseguire l'operazione. Riprova pi tardi.
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