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Tsung-Heng Tsai
Tsung-Heng Tsai
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Year
A high speed detection platform based on surface-enhanced Raman scattering for monitoring antibiotic-induced chemical changes in bacteria cell wall
TT Liu, YH Lin, CS Hung, TJ Liu, Y Chen, YC Huang, TH Tsai, HH Wang, ...
PloS one 4 (5), e5470, 2009
2112009
Utilization of metabolomics to identify serum biomarkers for hepatocellular carcinoma in patients with liver cirrhosis
HW Ressom, JF Xiao, L Tuli, RS Varghese, B Zhou, TH Tsai, ...
Analytica chimica acta 743, 90-100, 2012
1662012
LC–MS Based Serum Metabolomics for Identification of Hepatocellular Carcinoma Biomarkers in Egyptian Cohort
JF Xiao, RS Varghese, B Zhou, MR Nezami Ranjbar, Y Zhao, TH Tsai, ...
Journal of proteome research 11 (12), 5914-5923, 2012
1472012
SETER/PR: a robust 18-gene predictor for sensitivity to endocrine therapy for metastatic breast cancer
BV Sinn, C Fu, R Lau, J Litton, TH Tsai, R Murthy, A Tam, E Andreopoulou, ...
NPJ breast cancer 5 (1), 16, 2019
1052019
LC‐MS/MS‐based serum proteomics for identification of candidate biomarkers for hepatocellular carcinoma
TH Tsai, E Song, R Zhu, C Di Poto, M Wang, Y Luo, RS Varghese, ...
Proteomics 15 (13), 2369-2381, 2015
892015
MassIVE. quant: a community resource of quantitative mass spectrometry–based proteomics datasets
M Choi, J Carver, C Chiva, M Tzouros, T Huang, TH Tsai, B Pullman, ...
Nature Methods 17 (10), 981-984, 2020
632020
LC–MS profiling of N-glycans derived from human serum samples for biomarker discovery in hepatocellular carcinoma
TH Tsai, M Wang, C Di Poto, Y Hu, S Zhou, Y Zhao, RS Varghese, Y Luo, ...
Journal of proteome research 13 (11), 4859-4868, 2014
572014
Preprocessing and Analysis of LC-MS-Based Proteomic Data
TH Tsai, M Wang, HW Ressom
Statistical Analysis in Proteomics, 63-76, 2016
392016
Membrane targeting and coupling of NHE1-integrinαIIbβ3-NCX1 by lipid rafts following integrin-ligand interactions trigger Ca2+ oscillations
YH Yi, PY Ho, TW Chen, WJ Lin, V Gukassyan, TH Tsai, DW Wang, ...
Journal of Biological Chemistry 284 (6), 3855-3864, 2009
362009
Multi-profile Bayesian alignment model for LC-MS data analysis with integration of internal standards
TH Tsai, MG Tadesse, C Di Poto, LK Pannell, Y Mechref, Y Wang, ...
Bioinformatics 29 (21), 2774-2780, 2013
322013
Selection of features with consistent profiles improves relative protein quantification in mass spectrometry experiments
TH Tsai, M Choi, B Banfai, Y Liu, BX MacLean, T Dunkley, O Vitek
Molecular & Cellular Proteomics 19 (6), 944-959, 2020
262020
Proteome-wide structural changes measured with limited proteolysis-mass spectrometry: an advanced protocol for high-throughput applications
L Malinovska, V Cappelletti, D Kohler, I Piazza, TH Tsai, M Pepelnjak, ...
Nature Protocols 18 (3), 659-682, 2023
252023
Using a spike-in experiment to evaluate analysis of LC-MS data
L Tuli, TH Tsai, RS Varghese, JF Xiao, A Cheema, HW Ressom
Proteome science 10 (1), 1-11, 2012
232012
Profile-Based LC-MS Data Alignment-A Bayesian Approach
TH Tsai, MG Tadesse, Y Wang, HW Ressom
IEEE/ACM Transactions on Computational Biology and Bioinformatics 10 (2 …, 2013
162013
MSstats Version 4.0: Statistical Analyses of Quantitative Mass Spectrometry-Based Proteomic Experiments with Chromatography-Based Quantification at Scale
D Kohler, M Staniak, TH Tsai, T Huang, N Shulman, OM Bernhardt, ...
Journal of Proteome Research, 2023
132023
Multiplexed proteomics of autophagy-deficient murine macrophages reveals enhanced antimicrobial immunity via the oxidative stress response
T Maculins, E Verschueren, T Hinkle, M Choi, P Chang, C Chalouni, ...
eLife 10, e62320, 2021
102021
MSstatsPTM: Statistical Relative Quantification of Posttranslational Modifications in Bottom-Up Mass Spectrometry-Based Proteomics
D Kohler, TH Tsai, E Verschueren, T Huang, T Hinkle, L Phu, M Choi, ...
Molecular & Cellular Proteomics 22 (1), 2023
72023
Hybrid svm/cart classification of pathogenic species of bacterial meningitis with surface-enhanced raman scattering
CY Huang, TH Tsai, BC Wen, CW Chung, YJ Li, YC Chuang, WJ Lin, ...
2010 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2010
62010
Probabilistic mixture regression models for alignment of LC-MS data
GK Befekadu, MG Tadesse, TH Tsai, HW Ressom
IEEE/ACM transactions on computational biology and bioinformatics 8 (5 …, 2010
62010
Measuring acetyl-CoA and acetylated histone turnover in vivo: Effect of a high fat diet
A Arias-Alvarado, M Aghayev, S Ilchenko, N Rachdaoui, J Lepp, TH Tsai, ...
Analytical Biochemistry 615, 114067, 2021
52021
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