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Karunakar Reddy Pothula
Karunakar Reddy Pothula
Scientist, Oerth Bio, Durham, NC
No verified email
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Year
Structural basis for nutrient acquisition by dominant members of the human gut microbiota
AJ Glenwright, KR Pothula, SP Bhamidimarri, DS Chorev, A Baslé, ...
Nature 541 (7637), 407, 2017
2182017
Cryo-EM structure of islet amyloid polypeptide fibrils reveals similarities with amyloid-β fibrils
C Röder, T Kupreichyk, L Gremer, LU Schäfer, KR Pothula, RBG Ravelli, ...
Nature structural & molecular biology 27 (7), 660-667, 2020
1262020
The structure of the antimicrobial human cathelicidin LL-37 shows oligomerization and channel formation in the presence of membrane mimics
E Sancho-Vaello, D Gil-Carton, P François, EJ Bonetti, M Kreir, ...
Scientific reports 10 (1), 17356, 2020
682020
Structural basis for chitin acquisition by marine Vibrio species
A Aunkham, M Zahn, A Kesireddy, KR Pothula, A Schulte, A Baslé, ...
Nature Communications 9 (1), 220, 2018
542018
Structural and functional insights into oligopeptide acquisition by the RagAB transporter from Porphyromonas gingivalis
JPBB Mariusz Madej, Joshua B. R. White, Zuzanna Nowakowska, Shaun Rawson ...
Nature Microbiology, 2020
512020
Simulations of outer membrane channels and their permeability
KR Pothula, CJF Solano, U Kleinekathöfer
Biochimica et Biophysica Acta (BBA)-Biomembranes 1858 (7), 1760-1771, 2016
502016
Integrating cryo-EM and NMR data
JA Geraets, KR Pothula, GF Schröder
Current opinion in structural biology 61, 173-181, 2020
292020
Fosfomycin permeation through the outer membrane porin OmpF
VK Golla, E Sans-Serramitjana, KR Pothula, L Benier, JA Bafna, ...
Biophysical journal 116 (2), 258-269, 2019
292019
The BROMOCEA Code: An Improved Grand Canonical Monte Carlo/Brownian Dynamics Algorithm Including Explicit Atoms
CJF Solano
Biophysical Journal 110 (3), 328a, 2016
212016
Simulation Study of Occk5 Functional Properties in Pseudomonas aeruginosa Outer Membranes
J Lee, KR Pothula, U Kleinekathöfer, W Im
The Journal of Physical Chemistry B 122 (34), 8185-8192, 2018
172018
Brownian dynamics approach including explicit atoms for studying ion permeation and substrate translocation across nanopores
CJF Solano, JD Prajapati, KR Pothula, U Kleinekathöfer
Journal of chemical theory and computation 14 (12), 6701-6713, 2018
152018
Protein arrangement effects on the exciton dynamics in the PE555 complex
S Chandrasekaran, KR Pothula, U Kleinekathöfer
The Journal of Physical Chemistry B 121 (15), 3228-3236, 2017
152017
Single residue acts as gate in OccK channels
KR Pothula, NN Dhanasekar, U Lamichhane, F Younas, D Pletzer, ...
The Journal of Physical Chemistry B 121 (12), 2614-2621, 2017
152017
Clustering cryo-EM images of helical protein polymers for helical reconstructions
KR Pothula, D Smyrnova, GF Schröder
Ultramicroscopy 203, 132-138, 2019
142019
Modeling of specific lipopolysaccharide binding sites on a Gram-negative porin
A Kesireddy, KR Pothula, J Lee, DS Patel, M Pathania, B van den Berg, ...
The Journal of Physical Chemistry B 123 (27), 5700-5708, 2019
132019
Theoretical analysis of ion conductance and gating transitions in the OpdK (OccK1) channel
KR Pothula, U Kleinekathöfer
Analyst 140 (14), 4855-4864, 2015
132015
Structural and functional insights into oligopeptide acquisition by the RagAB transporter from Porphyromonas gingivalis. Nat Microbiol 5: 1016–1025
M Madej, JBR White, Z Nowakowska, S Rawson, C Scavenius, JJ Enghild, ...
102020
Identification and characterization of smallest pore-forming protein in the cell wall of pathogenic Corynebacterium urealyticum DSM 7109
N Abdali, F Younas, S Mafakheri, KR Pothula, U Kleinekathöfer, A Tauch, ...
BMC biochemistry 19, 1-18, 2018
92018
Structures of Langya virus fusion protein ectodomain in pre-and postfusion conformation
AJ May, KR Pothula, K Janowska, P Acharya
Journal of virology 97 (6), e00433-23, 2023
72023
Clustering polymorphs of tau and IAPP fibrils with the CHEP algorithm
KR Pothula, JA Geraets, II Ferber, GF Schröder
Progress in Biophysics and Molecular Biology 160, 16-25, 2021
72021
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Articles 1–20