| Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes AL Sanborn, SSP Rao, SC Huang, NC Durand, MH Huntley, AI Jewett, ... Proceedings of the National Academy of Sciences 112 (47), E6456-E6465, 2015 | 1661 | 2015 |
| Moltemplate: A tool for coarse-grained modeling of complex biological matter and soft condensed matter physics AI Jewett, D Stelter, J Lambert, SM Saladi, OM Roscioni, M Ricci, L Autin, ... Journal of molecular biology 433 (11), 166841, 2021 | 252 | 2021 |
| Moltemplate a coarse-grained model assembly tool AI Jewett, Z Zhuang, JE Shea Biophysical Journal 104 (2), 169a, 2013 | 164 | 2013 |
| Effects of confinement in chaperonin assisted protein folding: rate enhancement by decreasing the roughness of the folding energy landscape A Baumketner, A Jewett, JE Shea Journal of molecular biology 332 (3), 701-713, 2003 | 142 | 2003 |
| Accelerated folding in the weak hydrophobic environment of a chaperonin cavity: creation of an alternate fast folding pathway AI Jewett, A Baumketner, JE Shea Proceedings of the National Academy of Sciences 101 (36), 13192-13197, 2004 | 128 | 2004 |
| Structural diversity of dimers of the Alzheimer amyloid-β (25–35) peptide and polymorphism of the resulting fibrils G Wei, AI Jewett, JE Shea Physical Chemistry Chemical Physics 12 (14), 3622-3629, 2010 | 99 | 2010 |
| Cooperativity, smooth energy landscapes and the origins of topology-dependent protein folding rates AI Jewett, VS Pande, KW Plaxco Journal of molecular biology 326 (1), 247-253, 2003 | 88 | 2003 |
| MINRMS: an efficient algorithm for determining protein structure similarity using root-mean-squared-distance AI Jewett, CC Huang, TE Ferrin Bioinformatics 19 (5), 625-634, 2003 | 81 | 2003 |
| Reconciling theories of chaperonin accelerated folding with experimental evidence AI Jewett, JE Shea Cellular and molecular life sciences 67, 255-276, 2010 | 67 | 2010 |
| Short FtsZ filaments can drive asymmetric cell envelope constriction at the onset of bacterial cytokinesis Q Yao, AI Jewett, YW Chang, CM Oikonomou, M Beeby, CV Iancu, ... The EMBO journal 36 (11), 1577-1589, 2017 | 59 | 2017 |
| Uncharacterized bacterial structures revealed by electron cryotomography MJ Dobro, CM Oikonomou, A Piper, J Cohen, K Guo, T Jensen, ... Journal of bacteriology 199 (17), 10.1128/jb. 00100-17, 2017 | 53 | 2017 |
| Sequence periodicity and secondary structure propensity in model proteins G Bellesia, AI Jewett, JE Shea Protein Science 19 (1), 141-154, 2010 | 43 | 2010 |
| Folding on the chaperone: yield enhancement through loose binding AI Jewett, JE Shea Journal of molecular biology 363 (5), 945-957, 2006 | 40 | 2006 |
| Integrated tools for structural and sequence alignment and analysis CC Huang, WR Novak, PC Babbitt, AI Jewett, TE Ferrin, TE Klein Biocomputing 2000, 230-241, 1999 | 40 | 1999 |
| The effect of surface tethering on the folding of the src-SH3 protein domain Z Zhuang, AI Jewett, P Soto, JE Shea Physical biology 6 (1), 015004, 2009 | 29 | 2009 |
| Assisted peptide folding by surface pattern recognition Z Zhuang, AI Jewett, S Kuttimalai, G Bellesia, S Gnanakaran, JE Shea Biophysical journal 100 (5), 1306-1315, 2011 | 23 | 2011 |
| Do chaperonins boost protein yields by accelerating folding or preventing aggregation? AI Jewett, JE Shea Biophysical Journal 94 (8), 2987-2993, 2008 | 17 | 2008 |
| Relative stability of de novo four–helix bundle proteins: Insights from coarse grained molecular simulations G Bellesia, AI Jewett, JE Shea Protein Science 20 (5), 818-826, 2011 | 13 | 2011 |
| Moltemplate A Jewett, A Lambert version 2015-8-17. Http://www. moltemplate. org/(accessed Oct 26, 2017 …, 2019 | 12 | 2019 |
| Moltemplate manual A Jewett University of California, Santa Barbara Shea Lab (August 2015), 2020 | 11 | 2020 |
Adrian L. SanbornStanford UniversityVerified email at stanford.edu
