admetSAR: A Comprehensive Source and Free Tool for Assessment of Chemical ADMET Properties F Cheng, W Li, Y Zhou, J Shen, Z Wu, G Liu, PW Lee, Y Tang Journal of Chemical Information and Modeling, 2012 | 828 | 2012 |
A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium Z Su, PP Łabaj, S Li, J Thierry-Mieg, D Thierry-Mieg, W Shi, C Wang, ... Nature biotechnology 32 (9), 903-914, 2014 | 563 | 2014 |
An in silico skin absorption model for fragrance materials J Shen, L Kromidas, T Schultz, S Bhatia Food and chemical toxicology 74, 164-176, 2014 | 484 | 2014 |
The concordance between RNA-seq and microarray data depends on chemical treatment and transcript abundance C Wang, B Gong, PR Bushel, J Thierry-Mieg, D Thierry-Mieg, J Xu, ... Nature biotechnology 32 (9), 926-932, 2014 | 336 | 2014 |
Role of acetylation and extracellular location of heat shock protein 90α in tumor cell invasion Y Yang, R Rao, J Shen, Y Tang, W Fiskus, J Nechtman, P Atadja, K Bhalla Cancer research 68 (12), 4833-4842, 2008 | 230 | 2008 |
Comparison of RNA-seq and microarray-based models for clinical endpoint prediction W Zhang, Y Yu, F Hertwig, J Thierry-Mieg, W Zhang, D Thierry-Mieg, ... Genome biology 16 (1), 1-12, 2015 | 223 | 2015 |
Comparison of cramer classification between toxtree, the OECD QSAR toolbox and expert judgment S Bhatia, T Schultz, D Roberts, J Shen, L Kromidas, AM Api Regulatory Toxicology and Pharmacology 71 (1), 52-62, 2015 | 209 | 2015 |
Estimation of ADME properties with substructure pattern recognition J Shen, F Cheng, Y Xu, W Li, Y Tang Journal of chemical information and modeling 50 (6), 1034-1041, 2010 | 195 | 2010 |
CERAPP: collaborative estrogen receptor activity prediction project K Mansouri, A Abdelaziz, A Rybacka, A Roncaglioni, A Tropsha, A Varnek, ... Environmental health perspectives 124 (7), 1023-1033, 2016 | 180 | 2016 |
Classification of cytochrome P450 inhibitors and noninhibitors using combined classifiers F Cheng, Y Yu, J Shen, L Yang, W Li, G Liu, PW Lee, Y Tang Journal of chemical information and modeling 51 (5), 996-1011, 2011 | 145 | 2011 |
T4 report: Toward good read-across practice (GRAP) guidance N Ball, MTD Cronin, J Shen, K Blackburn, ED Booth, M Bouhifd, E Donley, ... Altex 33 (2), 149, 2016 | 110 | 2016 |
Adverse drug events: database construction and in silico prediction F Cheng, W Li, X Wang, Y Zhou, Z Wu, J Shen, Y Tang Journal of chemical information and modeling 53 (4), 744-752, 2013 | 97 | 2013 |
Exploring coumarin egress channels in human cytochrome P450 2A6 by random acceleration and steered molecular dynamics simulations W Li, J Shen, G Liu, Y Tang, T Hoshino Proteins: Structure, Function, and Bioinformatics 79 (1), 271-281, 2011 | 80 | 2011 |
In Silico Assessment of Chemical Biodegradability F Cheng, Y Ikenaga, Y Zhou, Y Yu, W Li, J Shen, Z Du, L Chen, C Xu, ... Journal of Chemical Information and Modeling, 2012 | 68 | 2012 |
In silico prediction of Tetrahymena pyriformis toxicity for diverse industrial chemicals with substructure pattern recognition and machine learning methods F Cheng, J Shen, Y Yu, W Li, G Liu, PW Lee, Y Tang Chemosphere 82 (11), 1636-1643, 2011 | 65 | 2011 |
Homology modeling, molecular docking, and molecular dynamics simulations elucidated α-fetoprotein binding modes J Shen, W Zhang, H Fang, R Perkins, W Tong, H Hong BMC bioinformatics 14 (14), 1-11, 2013 | 61 | 2013 |
t4 report: Supporting read-across using biological data H Zhu, M Bouhifd, N Kleinstreuer, ED Kroese, Z Liu, T Luechtefeld, ... Altex 33 (2), 167, 2016 | 54 | 2016 |
Computational insights into the mechanism of ligand unbinding and selectivity of estrogen receptors J Shen, W Li, G Liu, Y Tang, H Jiang The Journal of Physical Chemistry B 113 (30), 10436-10444, 2009 | 53 | 2009 |
EADB: an estrogenic activity database for assessing potential endocrine activity J Shen, L Xu, H Fang, AM Richard, JD Bray, RS Judson, G Zhou, ... toxicological sciences 135 (2), 277-291, 2013 | 51 | 2013 |
Accuracy assessment of protein-based docking programs against RNA targets Y Li, J Shen, X Sun, W Li, G Liu, Y Tang Journal of chemical information and modeling 50 (6), 1134-1146, 2010 | 49 | 2010 |