Robert Best
TitleCited byYear
Optimization of the Additive CHARMM All-Atom Protein Force Field Targeting Improved Sampling of the Backbone ϕ, ψ and Side-Chain χ1 and χ2 Dihedral Angles
RB Best, X Zhu, J Shim, PEM Lopes, J Mittal, M Feig, AD MacKerell Jr
Journal of chemical theory and computation 8 (9), 3257-3273, 2012
17852012
Simultaneous determination of protein structure and dynamics
K Lindorff-Larsen, RB Best, MA DePristo, CM Dobson, M Vendruscolo
Nature 433 (7022), 128, 2005
6592005
Optimized molecular dynamics force fields applied to the helix− coil transition of polypeptides
RB Best, G Hummer
The journal of physical chemistry B 113 (26), 9004-9015, 2009
5772009
Are current molecular dynamics force fields too helical?
RB Best, NV Buchete, G Hummer
Biophysical journal 95 (1), L07-L09, 2008
4182008
Reaction coordinates and rates from transition paths
RB Best, G Hummer
Proceedings of the National Academy of Sciences 102 (19), 6732-6737, 2005
4172005
Are current molecular dynamics force fields too helical?
RB Best, NV Buchete, G Hummer
Biophysical journal 95 (1), L07-L09, 2008
4082008
Polarizable atomic multipole-based AMOEBA force field for proteins
Y Shi, Z Xia, J Zhang, R Best, C Wu, JW Ponder, P Ren
Journal of chemical theory and computation 9 (9), 4046-4063, 2013
3762013
Characterizing the unfolded states of proteins using single-molecule FRET spectroscopy and molecular simulations
KA Merchant, RB Best, JM Louis, IV Gopich, WA Eaton
Proceedings of the National Academy of Sciences 104 (5), 1528-1533, 2007
3242007
Hidden complexity in the mechanical properties of titin
PM Williams, SB Fowler, RB Best, JL Toca-Herrera, KA Scott, A Steward, ...
Nature 422 (6930), 446, 2003
2872003
Balanced protein–water interactions improve properties of disordered proteins and non-specific protein association
RB Best, W Zheng, J Mittal
Journal of chemical theory and computation 10 (11), 5113-5124, 2014
2772014
Native contacts determine protein folding mechanisms in atomistic simulations
RB Best, G Hummer, WA Eaton
Proceedings of the National Academy of Sciences 110 (44), 17874-17879, 2013
2512013
Can non-mechanical proteins withstand force? Stretching barnase by atomic force microscopy and molecular dynamics simulation
RB Best, B Li, A Steward, V Daggett, J Clarke
Biophysical journal 81 (4), 2344-2356, 2001
2502001
Coordinate-dependent diffusion in protein folding
RB Best, G Hummer
Proceedings of the National Academy of Sciences 107 (3), 1088-1093, 2010
2392010
Mechanical unfolding of a titin Ig domain: structure of unfolding intermediate revealed by combining AFM, molecular dynamics simulations, NMR and protein engineering
SB Fowler, RB Best, JLT Herrera, TJ Rutherford, A Steward, E Paci, ...
Journal of molecular biology 322 (4), 841-849, 2002
2102002
Binding-induced folding of a natively unstructured transcription factor
AG Turjanski, JS Gutkind, RB Best, G Hummer
PLoS computational biology 4 (4), e1000060, 2008
1972008
Effect of flexibility and cis residues in single-molecule FRET studies of polyproline
RB Best, KA Merchant, IV Gopich, B Schuler, A Bax, WA Eaton
Proceedings of the National Academy of Sciences 104 (48), 18964-18969, 2007
1862007
Protein simulations with an optimized water model: cooperative helix formation and temperature-induced unfolded state collapse
RB Best, J Mittal
The Journal of Physical Chemistry B 114 (46), 14916-14923, 2010
1832010
Single-molecule spectroscopy of the temperature-induced collapse of unfolded proteins
D Nettels, S Müller-Späth, F Küster, H Hofmann, D Haenni, S Rüegger, ...
Proceedings of the National Academy of Sciences 106 (49), 20740-20745, 2009
1682009
Mechanical unfolding of a titin Ig domain: structure of transition state revealed by combining atomic force microscopy, protein engineering and molecular dynamics simulations
RB Best, SB Fowler, JLT Herrera, A Steward, E Paci, J Clarke
Journal of molecular biology 330 (4), 867-877, 2003
1672003
Diffusive model of protein folding dynamics with Kramers turnover in rate
RB Best, G Hummer
Physical review letters 96 (22), 228104, 2006
1562006
The system can't perform the operation now. Try again later.
Articles 1–20