Hiroshi C. Watanabe
Hiroshi C. Watanabe
Graduate School of Science and Technology, Keio University
Email verificata su keio.jp - Home page
Citata da
Citata da
Conversion of channelrhodopsin into a light-gated chloride channel
J Wietek, JS Wiegert, N Adeishvili, F Schneider, H Watanabe, ...
Science 344 (6182), 409-412, 2014
Towards an understanding of channelrhodopsin function: simulations lead to novel insights of the channel mechanism
HC Watanabe, K Welke, DJ Sindhikara, P Hegemann, M Elstner
Journal of molecular biology 425 (10), 1795-1814, 2013
Structural model of channelrhodopsin
HC Watanabe, K Welke, F Schneider, S Tsunoda, F Zhang, K Deisseroth, ...
Journal of Biological Chemistry 287 (10), 7456-7466, 2012
Size-consistent multi-partitioning QM/MM: a stable and efficient adaptive QM/MM method
HC Watanabe, T Kubar, M Elstner
Journal of Chemical Theory and Computation 10 (10), 4242-4252, 2014
Active site structure and absorption spectrum of channelrhodopsin-2 wild-type and C128T mutant
Y Guo, FE Beyle, BM Bold, HC Watanabe, A Koslowski, W Thiel, ...
Chemical Science 7 (6), 3879-3891, 2016
Color tuning in binding pocket models of the chlamydomonas-type channelrhodopsins
K Welke, JS Frähmcke, HC Watanabe, P Hegemann, M Elstner
The journal of physical chemistry B 115 (50), 15119-15128, 2011
Origins of water molecules in the photosystem II crystal structure
N Sakashita, HC Watanabe, T Ikeda, K Saito, H Ishikita
Biochemistry 56 (24), 3049-3057, 2017
QM/MM simulations of vibrational spectra of bacteriorhodopsin and channelrhodopsin-2
K Welke, HC Watanabe, T Wolter, M Gaus, M Elstner
Physical Chemistry Chemical Physics 15 (18), 6651-6659, 2013
Electron transfer pathways in a multiheme cytochrome MtrF
HC Watanabe, Y Yamashita, H Ishikita
Proceedings of the National Academy of Sciences 114 (11), 2916-2921, 2017
An adaptive quantum mechanics/molecular mechanics method for the infrared spectrum of water: incorporation of the quantum effect between solute and solvent
HC Watanabe, M Banno, M Sakurai
Physical Chemistry Chemical Physics 18 (10), 7318-7333, 2016
Molecular mechanism of long-range synergetic color tuning between multiple amino acid residues in conger rhodopsin
HC Watanabe, Y Mori, T Tada, S Yokoyama, T Yamato
Biophysics 6, 67-78, 2010
Cation solvation with quantum chemical effects modeled by a size-consistent multi-partitioning quantum mechanics/molecular mechanics method
HC Watanabe, M Kubillus, T Kubař, R Stach, B Mizaikoff, H Ishikita
Physical Chemistry Chemical Physics 19 (27), 17985-17997, 2017
Spectral Tuning of Photoactive Yellow Protein
T Yamato, T Ishikura, T Kakitani, K Kawaguchi, H Watanabe
Photochemistry and photobiology 83 (2), 323-327, 2007
Improvement of Performance, Stability and Continuity by Modified Size-Consistent Multipartitioning Quantum Mechanical/Molecular Mechanical Method
HC Watanabe
Molecules 23 (8), 1882, 2018
Structurally conserved channels in cyanobacterial and plant photosystem II
N Sakashita, HC Watanabe, T Ikeda, H Ishikita
Photosynthesis Research 133 (1-3), 75-85, 2017
Rotamer decomposition and protein dynamics: efficiently analyzing dihedral populations from molecular dynamics
H Watanabe, M Elstner, T Steinbrecher
Journal of Computational Chemistry 34 (3), 198-205, 2013
Quantitative analysis of QM/MM boundary artifacts and correction in adaptive QM/MM simulations
HC Watanabe, Q Cui
Journal of chemical theory and computation 15 (7), 3917-3928, 2019
Mutational analysis of the conserved carboxylates of anion channelrhodopsin-2 (ACR2) expressed in Escherichia coli and their roles in anion transport
K Kojima, HC Watanabe, S Doi, N Miyoshi, M Kato, H Ishikita, Y Sudo
Biophysics and physicobiology 15, 179-188, 2018
Theoretical modeling of the O‐intermediate structure of bacteriorhodopsin
HC Watanabe, T Ishikura, T Yamato
Proteins: Structure, Function, and Bioinformatics 75 (1), 53-61, 2009
Reply to Breuer et al.: Molecular dynamics simulations do not provide functionally relevant values of redox potential in MtrF
HC Watanabe, Y Yamashita, H Ishikita
Proceedings of the National Academy of Sciences 114 (47), E10029-E10030, 2017
Il sistema al momento non può eseguire l'operazione. Riprova più tardi.
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