SymMap: an integrative database of traditional Chinese medicine enhanced by symptom mapping Y Wu, F Zhang, K Yang, S Fang, D Bu, H Li, L Sun, H Hu, K Gao, W Wang, ... Nucleic acids research 47 (D1), D1110-D1117, 2019 | 344 | 2019 |
HerGePred: heterogeneous network embedding representation for disease gene prediction K Yang, R Wang, G Liu, Z Shu, N Wang, R Zhang, J Yu, J Chen, X Li, ... IEEE journal of biomedical and health informatics 23 (4), 1805-1815, 2018 | 69 | 2018 |
FordNet: recommending traditional Chinese medicine formula via deep neural network integrating phenotype and molecule W Zhou, K Yang, J Zeng, X Lai, X Wang, C Ji, Y Li, P Zhang, S Li Pharmacological research 173, 105752, 2021 | 43 | 2021 |
PDGNet: predicting disease genes using a deep neural network with multi-view features K Yang, Y Zheng, K Lu, K Chang, N Wang, Z Shu, J Yu, B Liu, Z Gao, ... IEEE/ACM Transactions on Computational Biology and Bioinformatics 19 (1 …, 2020 | 29 | 2020 |
Heterogeneous network embedding for identifying symptom candidate genes K Yang, N Wang, G Liu, R Wang, J Yu, R Zhang, J Chen, X Zhou Journal of the American Medical Informatics Association 25 (11), 1452-1459, 2018 | 29 | 2018 |
Add-on Chinese medicine for coronavirus disease 2019 (ACCORD): a retrospective cohort study of hospital registries Z Shu, K Chang, Y Zhou, C Peng, X Li, W Cai, L Wei, Q Zheng, H Tian, ... The American Journal of Chinese Medicine 49 (03), 543-575, 2021 | 26 | 2021 |
Herb target prediction based on representation learning of symptom related heterogeneous network N Wang, P Li, X Hu, K Yang, Y Peng, Q Zhu, R Zhang, Z Gao, H Xu, B Liu, ... Computational and Structural Biotechnology Journal 17, 282-290, 2019 | 26 | 2019 |
Multistage analysis method for detection of effective herb prescription from clinical data K Yang, R Zhang, L He, Y Li, W Liu, C Yu, Y Zhang, X Li, Y Liu, W Xu, ... Frontiers of medicine 12, 206-217, 2018 | 20 | 2018 |
Network patterns of herbal combinations in traditional Chinese clinical prescriptions N Wang, N Du, Y Peng, K Yang, Z Shu, K Chang, D Wu, J Yu, C Jia, ... Frontiers in Pharmacology 11, 590824, 2021 | 19 | 2021 |
Prediction of molecular mechanisms for LianXia NingXin formula: a network pharmacology study Y Yang, K Yang, T Hao, G Zhu, R Ling, X Zhou, P Li Frontiers in physiology 9, 489, 2018 | 16 | 2018 |
DrugAI: a multi-view deep learning model for predicting drug–target activating/inhibiting mechanisms S Zhang, K Yang, Z Liu, X Lai, Z Yang, J Zeng, S Li Briefings in Bioinformatics 24 (1), bbac526, 2023 | 15 | 2023 |
TCMPR: TCM Prescription recommendation based on subnetwork term mapping and deep learning X Dong, Y Zheng, Z Shu, K Chang, D Yan, J Xia, Q Zhu, K Zhong, X Wang, ... 2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2021 | 14 | 2021 |
A network-based machine-learning framework to identify both functional modules and disease genes K Yang, K Lu, Y Wu, J Yu, B Liu, Y Zhao, J Chen, X Zhou Human Genetics 140, 897-913, 2021 | 13 | 2021 |
Integrated network analysis of symptom clusters across disease conditions K Lu, K Yang, E Niyongabo, Z Shu, J Wang, K Chang, Q Zou, J Jiang, ... Journal of Biomedical Informatics 107, 103482, 2020 | 11 | 2020 |
Identification of herbal categories active in pain disorder subtypes by machine learning help reveal novel molecular mechanisms of algesia X Xu, K Yang, F Zhang, W Liu, Y Wang, C Yu, J Wang, K Zhang, C Zhang, ... Pharmacological Research 156, 104797, 2020 | 11 | 2020 |
Heterogeneous network propagation for herb target identification K Yang, G Liu, N Wang, R Zhang, J Yu, J Chen, X Zhou BMC Medical Informatics and Decision Making 18, 27-37, 2018 | 11 | 2018 |
Integrated modules analysis to explore the molecular mechanisms of phlegm-stasis cementation syndrome with ischemic heart disease WM Xu, K Yang, LJ Jiang, JQ Hu, XZ Zhou Frontiers in Physiology 9, 324170, 2018 | 10 | 2018 |
Overlapping functional modules detection in PPI network with pair‐wise constrained non‐negative matrix tri‐factorisation G Liu, B Chai, K Yang, J Yu, X Zhou IET systems biology 12 (2), 45-54, 2018 | 9 | 2018 |
Decoding multilevel relationships with the human tissue-cell-molecule network S Hou, P Zhang, K Yang, L Wang, C Ma, Y Li, S Li Briefings in Bioinformatics 23 (5), bbac170, 2022 | 8 | 2022 |
Phenonizer: A fine-grained phenotypic named entity recognizer for chinese clinical texts Q Zou, K Yang, K Chang, X Zhang, X Li, X Zhou 2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2021 | 8 | 2021 |