Drug promiscuity in PDB: protein binding site similarity is key VJ Haupt, S Daminelli, M Schroeder PLoS one 8 (6), e65894, 2013 | 180 | 2013 |
Common neighbours and the local-community-paradigm for topological link prediction in bipartite networks S Daminelli, JM Thomas, C Durán, CV Cannistraci New Journal of Physics 17 (11), 2015 | 156 | 2015 |
Polypharmacology rescored: Protein–ligand interaction profiles for remote binding site similarity assessment S Salentin, VJ Haupt, S Daminelli, M Schroeder Progress in biophysics and molecular biology 116 (2-3), 174-186, 2014 | 152 | 2014 |
Pioneering topological methods for network-based drug–target prediction by exploiting a brain-network self-organization theory C Durán, S Daminelli, JM Thomas, VJ Haupt, M Schroeder, ... Briefings in bioinformatics 19 (6), 1183-1202, 2018 | 68 | 2018 |
Drug repositioning through incomplete bi-cliques in an integrated drug–target–disease network S Daminelli, VJ Haupt, M Reimann, M Schroeder Integrative Biology, 2012 | 64 | 2012 |
From malaria to cancer: Computational drug repositioning of amodiaquine using PLIP interaction patterns S Salentin, MF Adasme, JC Heinrich, VJ Haupt, S Daminelli, Y Zhang, ... Scientific reports 7 (1), 11401, 2017 | 55 | 2017 |
Extraction methods of red blood cell membrane proteins for Multidimensional Protein Identification Technology (MudPIT) analysis A De Palma, A Roveri, M Zaccarin, L Benazzi, S Daminelli, G Pantano, ... Journal of Chromatography A 1217 (33), 5328-5336, 2010 | 36 | 2010 |
Discovery of Mycobacterium tuberculosis InhA Inhibitors by Binding Sites Comparison and Ligands Prediction T Štular, S Lešnik, K Rožman, J Schink, M Zdouc, A Ghysels, F Liu, ... Journal of medicinal chemistry 59 (24), 11069-11078, 2016 | 34 | 2016 |
Computational drug repositioning by target hopping: A use case in chagas disease V Joachim Haupt, J E. Aguilar Uvalle, S Salentin, S Daminelli, ... Current Pharmaceutical Design 22 (21), 3124-3134, 2016 | 18 | 2016 |
Bioinformatics tools for mass spectrometry-based proteomics analysis D Di Silvestre, S Daminelli, P Brunetti, PL Mauri Reviews in Pharmaceutical and Biomedical Analysis-BENTHAM SCIENCE PUBLISHERS …, 2010 | 4 | 2010 |
Visualization and Interactive Analysis for Complex Networks by means of Lossless Network Compression M Reimann, L Royer, S Daminelli, M Schroeder Computational Network Theory: Theoretical Foundations and Applications 5, 280, 2015 | 3 | 2015 |
Transcriptome profiling of ST3GAL4 and FUT7 in multiple tumor types and prognostic value in adult acute myeloid leukemia WE Fogler, V Deng, D Stewart, M Jarman, S Daminelli, A Carr, ... Cancer Research 80 (16_Supplement), 5867-5867, 2020 | | 2020 |
Association of tumor fusion burden with immune presence and androgen sensitivity in prostate cancer M Wagle, K Yuen, EE Kadel, T Holcomb, S Srinivasan, J Castillo, ... Cancer Research 79 (13_Supplement), 2149-2149, 2019 | | 2019 |
P300/CBP inhibitor CCS1477 targets 22Rv1 prostate tumor AR and c-myc gene expression in vivo P Elvin, N Pegg, S Daminelli, I Eden, B Young, A Prosser, J Worthington, ... Cancer Research 79 (13_Supplement), 1019-1019, 2019 | | 2019 |
Drug Repositioning with Incomplete Bi-cliques and Structural Bioinformatics S Daminelli | | 2014 |