Bobbie-Jo Webb-Robertson
Bobbie-Jo Webb-Robertson
Senior Research Scientist, Pacific Northwest National Laboratory
Verified email at pnnl.gov
Title
Cited by
Cited by
Year
Normalization approaches for removing systematic biases associated with mass spectrometry and label-free proteomics
SJ Callister, RC Barry, JN Adkins, ET Johnson, W Qian, ...
Journal of proteome research 5 (2), 277-286, 2006
3142006
Review, evaluation, and discussion of the challenges of missing value imputation for mass spectrometry-based label-free global proteomics
BJM Webb-Robertson, HK Wiberg, MM Matzke, JN Brown, J Wang, ...
Journal of proteome research 14 (5), 1993-2001, 2015
1402015
Challenges in biomarker discovery: combining expert insights with statistical analysis of complex omics data
JE McDermott, J Wang, H Mitchell, BJ Webb-Robertson, R Hafen, ...
Expert opinion on medical diagnostics 7 (1), 37-51, 2013
1402013
Quantitative proteomics analysis of adsorbed plasma proteins classifies nanoparticles with different surface properties and size
H Zhang, KE Burnum, ML Luna, BO Petritis, JS Kim, WJ Qian, RJ Moore, ...
Proteomics 11 (23), 4569-4577, 2011
1172011
Mechanisms of severe acute respiratory syndrome coronavirus-induced acute lung injury
LE Gralinski, A Bankhead, S Jeng, VD Menachery, S Proll, SE Belisle, ...
MBio 4 (4), 2013
1102013
Comparative proteomics and pulmonary toxicity of instilled single-walled carbon nanotubes, crocidolite asbestos, and ultrafine carbon black in mice
JG Teeguarden, BJ Webb-Robertson, KM Waters, AR Murray, ER Kisin, ...
Toxicological Sciences 120 (1), 123-135, 2011
1102011
Pathogenic influenza viruses and coronaviruses utilize similar and contrasting approaches to control interferon-stimulated gene responses
VD Menachery, AJ Eisfeld, A Schäfer, L Josset, AC Sims, S Proll, S Fan, ...
MBio 5 (3), 2014
1072014
A support vector machine model for the prediction of proteotypic peptides for accurate mass and time proteomics
BJM Webb-Robertson, WR Cannon, CS Oehmen, AR Shah, ...
Bioinformatics 26 (13), 1677-1683, 2010
982010
Computational methods for mass spectrometry proteomics
I Eidhammer, K Flikka, L Martens, SO Mikalsen
John Wiley & Sons, 2007
902007
The undiagnosed diseases network: accelerating discovery about health and disease
RB Ramoni, JJ Mulvihill, DR Adams, P Allard, EA Ashley, JA Bernstein, ...
The American Journal of Human Genetics 100 (2), 185-192, 2017
822017
MARRVEL: integration of human and model organism genetic resources to facilitate functional annotation of the human genome
J Wang, R Al-Ouran, Y Hu, SY Kim, YW Wan, MF Wangler, S Yamamoto, ...
The American Journal of Human Genetics 100 (6), 843-853, 2017
762017
A comparative analysis of computational approaches to relative protein quantification using peptide peak intensities in label‐free LC‐MS proteomics experiments
MM Matzke, JN Brown, MA Gritsenko, TO Metz, JG Pounds, KD Rodland, ...
Proteomics 13 (3-4), 493-503, 2013
732013
Release of severe acute respiratory syndrome coronavirus nuclear import block enhances host transcription in human lung cells
AC Sims, SC Tilton, VD Menachery, LE Gralinski, A Schäfer, MM Matzke, ...
Journal of virology 87 (7), 3885-3902, 2013
722013
Combined statistical analyses of peptide intensities and peptide occurrences improves identification of significant peptides from MS-based proteomics data
BJM Webb-Robertson, LA McCue, KM Waters, MM Matzke, JM Jacobs, ...
Journal of proteome research 9 (11), 5748-5756, 2010
702010
Improved quality control processing of peptide-centric LC-MS proteomics data
MM Matzke, KM Waters, TO Metz, JM Jacobs, AC Sims, RS Baric, ...
Bioinformatics 27 (20), 2866-2872, 2011
682011
1H Nuclear Magnetic Resonance Metabolomics Analysis Identifies Novel Urinary Biomarkers for Lung Function
JL McClay, DE Adkins, NG Isern, TM O’Connell, JB Wooten, BK Zedler, ...
Journal of proteome research 9 (6), 3083-3090, 2010
682010
MPLEx: a robust and universal protocol for single-sample integrative proteomic, metabolomic, and lipidomic analyses
ES Nakayasu, CD Nicora, AC Sims, KE Burnum-Johnson, YM Kim, ...
MSystems 1 (3), 2016
672016
A study of spectral integration and normalization in NMR-based metabonomic analyses
BJM Webb-Robertson, DF Lowry, KH Jarman, SJ Harbo, QR Meng, ...
Journal of pharmaceutical and biomedical analysis 39 (3-4), 830-836, 2005
652005
A statistical selection strategy for normalization procedures in LC‐MS proteomics experiments through dataset‐dependent ranking of normalization scaling factors
BJM Webb‐Robertson, MM Matzke, JM Jacobs, JG Pounds, KM Waters
Proteomics 11 (24), 4736-4741, 2011
622011
SVM-HUSTLE—an iterative semi-supervised machine learning approach for pairwise protein remote homology detection
AR Shah, CS Oehmen, BJ Webb-Robertson
Bioinformatics 24 (6), 783-790, 2008
542008
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