|Epidermal Growth Factor Receptor Tyrosine Kinase Inhibitor–Resistant Disease|
K Ohashi, YE Maruvka, F Michor, W Pao
Journal of Clinical Oncology, 2013
|Tumor cells can follow distinct evolutionary paths to become resistant to epidermal growth factor receptor inhibition|
AN Hata, MJ Niederst, HL Archibald, M Gomez-Caraballo, FM Siddiqui, ...
Nature medicine 22 (3), 262, 2016
|Polyploidy can drive rapid adaptation in yeast|
AM Selmecki, YE Maruvka, PA Richmond, M Guillet, N Shoresh, ...
Nature 519 (7543), 349, 2015
|Mutational strand asymmetries in cancer genomes reveal mechanisms of DNA damage and repair|
NJ Haradhvala, P Polak, P Stojanov, KR Covington, E Shinbrot, JM Hess, ...
Cell 164 (3), 538-549, 2016
|Recurrent and functional regulatory mutations in breast cancer|
E Rheinbay, P Parasuraman, J Grimsby, G Tiao, JM Engreitz, J Kim, ...
Nature 547 (7661), 55, 2017
|Genetic and transcriptional evolution alters cancer cell line drug response|
U Ben-David, B Siranosian, G Ha, H Tang, Y Oren, K Hinohara, ...
Nature 560 (7718), 325, 2018
|A mutational signature reveals alterations underlying deficient homologous recombination repair in breast cancer|
P Polak, J Kim, LZ Braunstein, R Karlic, NJ Haradhavala, G Tiao, ...
Nature genetics 49 (10), 1476, 2017
|Cell lineage analysis of acute leukemia relapse uncovers the role of replication-rate heterogeneity and microsatellite instability|
LI Shlush, N Chapal-Ilani, R Adar, N Pery, Y Maruvka, A Spiro, R Shouval, ...
Blood 120 (3), 603-612, 2012
|Cell lineage analysis of the mammalian female germline|
Y Reizel, S Itzkovitz, R Adar, J Elbaz, A Jinich, N Chapal-Ilani, ...
PLoS genetics 8 (2), e1002477, 2012
|Colon stem cell and crypt dynamics exposed by cell lineage reconstruction|
Y Reizel, N Chapal-Ilani, R Adar, S Itzkovitz, J Elbaz, YE Maruvka, ...
PLoS Genetics 7 (7), e1002192, 2011
|Next-generation characterization of the Cancer Cell Line Encyclopedia|
M Ghandi, FW Huang, J Jané-Valbuena, GV Kryukov, CC Lo, ...
Nature 569 (7757), 503, 2019
|Analysis of somatic microsatellite indels identifies driver events in human tumors|
YE Maruvka, KW Mouw, R Karlic, P Parasuraman, A Kamburov, P Polak, ...
Nature biotechnology 35 (10), 951, 2017
|Nonlocal competition and logistic growth: Patterns, defects, and fronts|
YE Maruvka, NM Shnerb
Physical Review E 73 (1), 011903, 2006
|Distinct mutational signatures characterize concurrent loss of polymerase proofreading and mismatch repair|
NJ Haradhvala, J Kim, YE Maruvka, P Polak, D Rosebrock, D Livitz, ...
Nature communications 9 (1), 1746, 2018
|The Birth-Death-Mutation process: a new paradigm for fat tailed distributions|
YE Maruvka, DA Kessler, NM Shnerb
PLoS ONE 6 (11), e26480, 2011
|Universal features of surname distribution in a subsample of a growing population|
YE Maruvka, NM Shnerb, DA Kessler
Journal of theoretical biology 262 (2), 245-256, 2010
|Model for macroevolutionary dynamics|
YE Maruvka, NM Shnerb, DA Kessler, RE Ricklefs
Proceedings of the National Academy of Sciences 110 (27), E2460-E2469, 2013
|Recovering population parameters from a single gene genealogy: an unbiased estimator of the growth rate|
YE Maruvka, NM Shnerb, Y Bar-Yam, J Wakeley
Molecular biology and evolution 28 (5), 1617-1631, 2010
|Neutral dynamics and cluster statistics in a tropical forest|
E Seri, YE Maruvka, NM Shnerb
The American Naturalist 180 (6), E161-E173, 2012
|Discovery and characterization of coding and non-coding driver mutations in more than 2,500 whole cancer genomes|
E Rheinbay, MM Nielsen, F Abascal, G Tiao, H Hornshøj, JM Hess, ...
bioRxiv, 237313, 2017