Marco Galardini
Marco Galardini
Verified email at bu.edu
Title
Cited by
Cited by
Year
CONTIGuator: a bacterial genomes finishing tool for structural insights on draft genomes
M Galardini, EG Biondi, M Bazzicalupo, A Mengoni
Source code for biology and medicine 6 (1), 11, 2011
2312011
Construction and Analysis of Two Genome-Scale Deletion Libraries for Bacillus subtilis
BM Koo, G Kritikos, JD Farelli, H Todor, K Tong, H Kimsey, I Wapinski, ...
Cell systems 4 (3), 291-305. e7, 2017
1672017
MeDuSa: a multi-draft based scaffolder
E Bosi, B Donati, M Galardini, S Brunetti, MF Sagot, P Liˇ, P Crescenzi, ...
Bioinformatics 31 (15), 2443-2451, 2015
1582015
The success of Acinetobacter species; genetic, metabolic and virulence attributes
AY Peleg, A de Breij, MD Adams, GM Cerqueira, S Mocali, M Galardini, ...
PloS one 7 (10), e46984, 2012
1522012
Exploring the symbiotic pangenome of the nitrogen-fixing bacterium Sinorhizobium meliloti
M Galardini, A Mengoni, M Brilli, F Pini, A Fioravanti, S Lucas, A Lapidus, ...
BMC genomics 12 (1), 235, 2011
922011
Replicon-dependent bacterial genome evolution: the case of Sinorhizobium meliloti
M Galardini, F Pini, M Bazzicalupo, EG Biondi, A Mengoni
Genome biology and evolution 5 (3), 542-558, 2013
762013
Nutritional preferences of human gut bacteria reveal their metabolic idiosyncrasies
M Tramontano, S Andrejev, M Pruteanu, M KlŘnemann, M Kuhn, ...
Nature microbiology 3 (4), 514-522, 2018
692018
Plant-Bacteria Association and Symbiosis: Are There Common Genomic Traits in Alphaproteobacteria?
F Pini, M Galardini, M Bazzicalupo, A Mengoni
Genes 2 (4), 1017-1032, 2011
642011
Advances in host plant and rhizobium genomics to enhance symbiotic nitrogen fixation in grain legumes
SL Dwivedi, KL Sahrawat, HD Upadhyaya, A Mengoni, M Galardini, ...
Advances in Agronomy 129, 1-116, 2015
602015
The DivJ, CbrA and PleC system controls DivK phosphorylation and symbiosis in Sinorhizobium meliloti
F Pini, B Frage, L Ferri, NJ De Nisco, SS Mohapatra, L Taddei, ...
Molecular microbiology 90 (1), 54-71, 2013
582013
DuctApe: a suite for the analysis and correlation of genomic and OmniLog™ phenotype microarray data
M Galardini, A Mengoni, EG Biondi, R Semeraro, A Florio, M Bazzicalupo, ...
Genomics 103 (1), 1-10, 2014
522014
Metabolic modelling reveals the specialization of secondary replicons for niche adaptation in Sinorhizobium meliloti
A Checcucci, M Bazzicalupo, A Mengoni, C Viti, L Dziewit, TM Finan, ...
Nature communications 7 (1), 1-10, 2016
472016
COLOMBOS v3. 0: leveraging gene expression compendia for cross-species analyses
M Moretto, P Sonego, N Dierckxsens, M Brilli, L Bianco, ...
Nucleic acids research 44 (D1), D620-D623, 2016
392016
A resource of variant effect predictions of single nucleotide variants in model organisms
O Wagih, M Galardini, BP Busby, D Memon, A Typas, P Beltrao
Molecular Systems Biology 14 (12), e8430, 2018
36*2018
Evaluation of the Performances of Ribosomal Database Project (RDP) Classifier for Taxonomic Assignment of 16S rRNA Metabarcoding Sequences Generated from Illumina-Solexa NGS
G Bacci, A Bani, M Bazzicalupo, MT Ceccherini, M Galardini, P Nannipieri, ...
Journal of genomics 3, 36, 2015
362015
Evolution of intra-specific regulatory networks in a multipartite bacterial genome
M Galardini, M Brilli, G Spini, M Rossi, B Roncaglia, A Bani, ...
PLoS computational biology 11 (9), e1004478, 2015
292015
pyseer: a comprehensive tool for microbial pangenome-wide association studies
JA Lees, M Galardini, SD Bentley, JN Weiser, J Corander
Bioinformatics 34 (24), 4310-4312, 2018
282018
Phenotype inference in an Escherichia coli strain panel.
M Galardini, A Koumoutsi, L Herrera-Dominguez, JAV Cordero, ...
eLife 6, 2017
27*2017
Mixed nodule infection in Sinorhizobium meliloti–Medicago sativa symbiosis suggest the presence of cheating behavior
A Checcucci, E Azzarello, M Bazzicalupo, M Galardini, A Lagomarsino, ...
Frontiers in plant science 7, 835, 2016
252016
Genomics of biological wastewater treatment
RJ Siezen, M Galardini
Microbial biotechnology 1 (5), 333, 2008
252008
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Articles 1–20