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Po-hung Wang
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Crowding in cellular environments at an atomistic level from computer simulations
M Feig, I Yu, P Wang, G Nawrocki, Y Sugita
The Journal of Physical Chemistry B 121 (34), 8009-8025, 2017
1622017
Slow-down in diffusion in crowded protein solutions correlates with transient cluster formation
G Nawrocki, P Wang, I Yu, Y Sugita, M Feig
The Journal of Physical Chemistry B 121 (49), 11072-11084, 2017
1082017
The oxidative inactivation of FeFe hydrogenase reveals the flexibility of the H-cluster
V Fourmond, C Greco, K Sybirna, C Baffert, PH Wang, P Ezanno, ...
Nature chemistry 6 (4), 336-342, 2014
1062014
Multiscale Simulation Reveals Multiple Pathways for H2 and O2 Transport in a [NiFe]-Hydrogenase
P Wang, RB Best, J Blumberger
Journal of the American Chemical Society 133 (10), 3548-3556, 2011
752011
Mechanistic insight into the blocking of CO diffusion in [NiFe]-hydrogenase mutants through multiscale simulation
P Wang, J Blumberger
Proceedings of the National Academy of Sciences 109 (17), 6399-6404, 2012
532012
Influence of protein crowder size on hydration structure and dynamics in macromolecular crowding
P Wang, I Yu, M Feig, Y Sugita
Chemical Physics Letters 671, 63-70, 2017
522017
Uncovering a dynamically formed substrate access tunnel in carbon monoxide dehydrogenase/acetyl-CoA synthase
P Wang, M Bruschi, L De Gioia, J Blumberger
Journal of the American Chemical Society 135 (25), 9493-9502, 2013
472013
Combining experimental and theoretical methods to learn about the reactivity of gas-processing metalloenzymes
C Greco, V Fourmond, C Baffert, P Wang, S Dementin, P Bertrand, ...
Energy & Environmental Science 7 (11), 3543-3573, 2014
422014
Dynamics of nitric oxide controlled by protein complex in bacterial system
E Terasaka, K Yamada, PH Wang, K Hosokawa, R Yamagiwa, ...
Proceedings of the National Academy of Sciences 114 (37), 9888-9893, 2017
402017
A microscopic model for gas diffusion dynamics in a [NiFe]-hydrogenase
P Wang, RB Best, J Blumberger
Physical Chemistry Chemical Physics 13 (17), 7708-7719, 2011
282011
Challenges and opportunities in connecting simulations with experiments via molecular dynamics of cellular environments
M Feig, G Nawrocki, I Yu, P Wang, Y Sugita
Journal of Physics: Conference Series 1036 (1), 012010, 2018
262018
Identification of mutational hot spots for substrate diffusion: Application to myoglobin
D De Sancho, A Kubas, PH Wang, J Blumberger, RB Best
Journal of chemical theory and computation 11 (4), 1919-1927, 2015
192015
Glycan engineering of the SARS-CoV-2 receptor-binding domain elicits cross-neutralizing antibodies for SARS-related viruses
R Shinnakasu, S Sakakibara, H Yamamoto, P Wang, S Moriyama, N Sax, ...
Journal of Experimental Medicine 218 (12), e20211003, 2021
172021
Computation of rate constants for diffusion of small ligands to and from buried protein active sites
PH Wang, D De Sancho, RB Best, J Blumberger
Methods in enzymology 578, 299-326, 2016
62016
Author Correction: The oxidative inactivation of FeFe hydrogenase reveals the flexibility of the H-cluster
V Fourmond, C Greco, K Sybirna, C Baffert, PH Wang, P Ezanno, ...
Nature chemistry 11 (11), 1067, 2019
2019
Correction to Identification of Mutational Hot Spots for Substrate Diffusion: Application to Myoglobin
D De Sancho, A Kubas, PH Wang, J Blumberger, RB Best
Journal of chemical theory and computation 14 (5), 2822-2822, 2018
2018
Protein Diffusion in a Dense Solution Studied by All-Atom Molecular Dynamics Simulations
G Nawrocki, P Wang, I Yu, Y Sugita, M Feig
Biophysical Journal 114 (3), 233a-234a, 2018
2018
Diffusional dynamics of proteins under crowded conditions
M Feig, G Nawrocki, I Yu, P Wang, Y Sugita, T Kigawa
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 254, 2017
2017
2P131 The solvent-accessible surface area of proteins is a key factor for hydration structure and dynamics in crowded environment (07. Water & Hydration & Electrolyte, Poster …
P Wang, I Yu, M Feig, Y Sugita
Seibutsu Butsuri 54 (supplement1-2), S216, 2014
2014
Multiscale computational model for small ligand diffusion within proteins with application to hydrogenase and carbon monoxide dehyrogenase
PH Wang, R Best, J Blumberger
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 245, 2013
2013
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