Sofia Kyriazopoulou-Panagiotopoulou
Sofia Kyriazopoulou-Panagiotopoulou
Illumina, 10x Genomics, Stanford University Department of Computer Science
Email verificata su alumni.stanford.edu
Titolo
Citata da
Citata da
Anno
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
125642012
Haplotyping germline and cancer genomes with high-throughput linked-read sequencing
GXY Zheng, BT Lau, M Schnall-Levin, M Jarosz, JM Bell, CM Hindson, ...
Nature biotechnology 34 (3), 303-311, 2016
5882016
Predicting splicing from primary sequence with deep learning
K Jaganathan, SK Panagiotopoulou, JF McRae, SF Darbandi, D Knowles, ...
Cell 176 (3), 535-548. e24, 2019
4692019
Extensive sequencing of seven human genomes to characterize benchmark reference materials
JM Zook, D Catoe, J McDaniel, L Vang, N Spies, A Sidow, Z Weng, Y Liu, ...
Scientific data 3 (1), 1-26, 2016
4102016
Multi-platform discovery of haplotype-resolved structural variation in human genomes
MJP Chaisson, AD Sanders, X Zhao, A Malhotra, D Porubsky, T Rausch, ...
Nature communications 10 (1), 1-16, 2019
3702019
Extensive variation in chromatin states across humans
M Kasowski, S Kyriazopoulou-Panagiotopoulou, F Grubert, JB Zaugg, ...
Science 342 (6159), 750-752, 2013
3632013
Ubiquitous heterogeneity and asymmetry of the chromatin environment at regulatory elements
A Kundaje, S Kyriazopoulou-Panagiotopoulou, M Libbrecht, CL Smith, ...
Genome research 22 (9), 1735-1747, 2012
1772012
Resolving the full spectrum of human genome variation using Linked-Reads
P Marks, S Garcia, AM Barrio, K Belhocine, J Bernate, R Bharadwaj, ...
Genome research 29 (4), 635-645, 2019
1062019
Systems and methods for determining structural variation and phasing using variant call data
S Kyriazopoulou-Panagiotopoulou, P Marks, M Schnall-Levin, X Zheng, ...
US Patent 10,854,315, 2020
542020
Using 1ng of DNA to detect haplotype phasing and gene fusions from whole exome sequencing of cancer cell lines
M Jarosz, M Schnall-Levin, GXY Zheng, P Marks, ...
Cancer Research 75 (15 Supplement), 4742-4742, 2015
272015
Reconstruction of genealogical relationships with applications to Phase III of HapMap
S Kyriazopoulou-Panagiotopoulou, D Kashef Haghighi, SJ Aerni, ...
Bioinformatics 27 (13), i333-i341, 2011
212011
Deep Learning-Based Aberrant Splicing Detection
K Jaganathan, F Kai-How, SK PANAGIOTOPOULOU, JF McRAE
US Patent App. 16/160,980, 2019
42019
Systems and methods for determining the integrity of test strings with respect to a reference genome
S Kyriazopoulou-Panagiotopoulou, P Marks
US Patent 10,366,777, 2019
12019
Control variates as screening functions
S Kyriazopoulou-Panagiotopoulou, I Kontoyiannis, SP Meyn
Proceedings of the 3rd International Conference on Performance Evaluation …, 2008
12008
Systems and methods for determining structural variation and phasing using variant call data
S Kyriazopoulou-Panagiotopoulou, P Marks, M Schnall-Levin, X Zheng, ...
US Patent App. 17/098,139, 2021
2021
Systems and methods for determining the integrity of test strings with respect to a ground truth string
S Kyriazopoulou-Panagiotopoulou, P Marks
US Patent App. 16/934,994, 2021
2021
Systems and methods for determining the integrity of test strings with respect to a ground truth string
S Kyriazopoulou-Panagiotopoulou, P Marks
US Patent 10,748,643, 2020
2020
Deep Learning-Based Pathogenicity Classifier for Promoter Single Nucleotide Variants (pSNVs)
SK PANAGIOTOPOULOU, F Kai-How
US Patent App. 16/578,210, 2020
2020
Aberrant Splicing Detection Using Convolutional Neural Networks (CNNs)
K Jaganathan, F Kai-How, SK PANAGIOTOPOULOU, JF McRAE
US Patent App. 16/160,984, 2019
2019
Deep Learning-Based Splice Site Classification
K Jaganathan, F Kai-How, SK PANAGIOTOPOULOU, JF McRAE
US Patent App. 16/160,978, 2019
2019
Il sistema al momento non può eseguire l'operazione. Riprova più tardi.
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