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Shiran Abadi
Shiran Abadi
PhD student, Tel Aviv University
Verified email at mail.tau.ac.il
Title
Cited by
Cited by
Year
ConSurf 2016: an improved methodology to estimate and visualize evolutionary conservation in macromolecules
H Ashkenazy, S Abadi, E Martz, O Chay, I Mayrose, T Pupko, N Ben-Tal
Nucleic acids research 44 (W1), W344-W350, 2016
25732016
The Chromosome Counts Database (CCDB)–a community resource of plant chromosome numbers
A Rice, L Glick, S Abadi, M Einhorn, NM Kopelman, A Salman-Minkov, ...
New Phytologist 206 (1), 19-26, 2015
6952015
Model selection may not be a mandatory step for phylogeny reconstruction
S Abadi, D Azouri, T Pupko, I Mayrose
Nature communications 10 (1), 934, 2019
2852019
A machine learning approach for predicting CRISPR-Cas9 cleavage efficiencies and patterns underlying its mechanism of action
S Abadi, WX Yan, D Amar, I Mayrose
PLoS computational biology 13 (10), e1005807, 2017
1792017
COVID‐19 pandemic‐related lockdown: response time is more important than its strictness
G Loewenthal, S Abadi, O Avram, K Halabi, N Ecker, N Nagar, I Mayrose, ...
EMBO molecular medicine 12 (11), e13171, 2020
482020
ModelTeller: Model Selection for Optimal Phylogenetic Reconstruction Using Machine Learning
S Abadi, O Avram, S Rosset, T Pupko, I Mayrose
Molecular Biology and Evolution 154, 2020
342020
Harnessing machine learning to guide phylogenetic-tree search algorithms
D Azouri, S Abadi, Y Mansour, I Mayrose, T Pupko
Nature communications 12 (1), 1983, 2021
292021
CRISPys: optimal sgRNA design for editing multiple members of a gene family using the CRISPR system
G Hyams, S Abadi, S Lahav, A Avni, E Halperin, E Shani, I Mayrose
Journal of molecular biology 430 (15), 2184-2195, 2018
232018
Prediction of synonymous corrections by the BE-FF computational tool expands the targeting scope of base editing
R Rabinowitz, S Abadi, S Almog, D Offen
Nucleic Acids Research 48 (W1), W340-W347, 2020
132020
Null mutants of a tomato Rho of plants exhibit enhanced water use efficiency without a penalty to yield
MR Puli, P Muchoki, A Yaaran, N Gershon, A Dalal, F Nalufunjo, Y Dagan, ...
Proceedings of the National Academy of Sciences 121 (4), e2309006120, 2024
12024
Harnessing machine learning to boost heuristic strategies for phylogenetic-tree search
D Azouri, S Abadi, Y Mansour, I Mayrose, T Pupko
2020
COVID-19 pandemic-related lockdown: response time is more important than its strictness (preprint)
G Loewenthal, S Abadi, O Avram, K Halabi, N Ecker, N Nagar, I Mayrose, ...
2020
5.3. A3: The Chromosome Counts Database (CCDB)–a community resource of plant chromosome numbers
A Rice, L Glick, S Abadi, M Einhorn, NM Kopelman, A Salman-Minkov, ...
Learning Evolutionary and Genomic Processes from Massive Nucleotide Data 13 …, 2017
2017
5.5. A5: NADPH oxidase-dependent enhanced stomata closure of Rho-null tomatoes confers increased water use efficiency
M Puli, P Muchoki, N Gershon, A Dalal, S Abadi, N Sade, S Yalovsky
Learning Evolutionary and Genomic Processes from Massive Nucleotide Data 13 …, 2017
2017
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