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Paul Torrillo
Paul Torrillo
PhD Student at MIT
Verified email at mit.edu
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Year
A suite of tutorials for the WESTPA rare-events sampling software [Article v1. 0]
AT Bogetti, B Mostofian, A Dickson, AJ Pratt, AS Saglam, PO Harrison, ...
Living journal of computational molecular science 1 (2), 2019
6622019
WESTPA 2.0: High-performance upgrades for weighted ensemble simulations and analysis of longer-timescale applications
JD Russo, S Zhang, JMG Leung, AT Bogetti, JP Thompson, AJ DeGrave, ...
Journal of Chemical Theory and Computation 18 (2), 638-649, 2022
342022
A minimal, adaptive binning scheme for weighted ensemble simulations
PA Torrillo, AT Bogetti, LT Chong
The Journal of Physical Chemistry A 125 (7), 1642-1649, 2021
212021
Mechanical causes and implications of repetitive DNA motifs
P Torrillo, D Swigon
bioRxiv, 2024.04. 06.588425, 2024
2024
Reversions mask the contribution of adaptive evolution in microbiomes
PA Torrillo, TD Lieberman
bioRxiv, 2023
2023
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Articles 1–5