| Transcription facilitated genome-wide recruitment of topoisomerase I and DNA gyrase W Ahmed, C Sala, SR Hegde, RK Jha, ST Cole, V Nagaraja PLoS genetics 13 (5), e1006754, 2017 | 61 | 2017 |
| Dynamic changes in protein functional linkage networks revealed by integration with gene expression data SR Hegde, P Manimaran, SC Mande PLoS computational biology 4 (11), e1000237, 2008 | 42 | 2008 |
| Prediction of conditional gene essentiality through graph theoretical analysis of genome-wide functional linkages P Manimaran, SR Hegde, SC Mande Molecular Biosystems 5 (12), 1936-1942, 2009 | 32 | 2009 |
| Understanding communication signals during mycobacterial latency through predicted genome-wide protein interactions and boolean modeling SR Hegde, H Rajasingh, C Das, SS Mande, SC Mande PloS one 7 (3), e33893, 2012 | 31 | 2012 |
| Computational Identification of the Proteins Associated With Quorum Sensing and Biofilm Formation in Mycobacterium tuberculosis SR Hegde Frontiers in Microbiology 10, 3011, 2020 | 22 | 2020 |
| Genome-wide identification of the context-dependent sRNA expression in Mycobacterium tuberculosis VKG Ami, R Balasubramanian, SR Hegde BMC genomics 21 (1), 1-12, 2020 | 13 | 2020 |
| Revisiting intrinsic transcription termination in mycobacteria: U-tract downstream of secondary structure is dispensable for termination E Ahmad, SR Hegde, V Nagaraja Biochemical and Biophysical Research Communications, 2019 | 8 | 2019 |
| Differential enrichment of regulatory motifs in the composite network of protein-protein and gene regulatory interactions SR Hegde, K Pal, SC Mande BMC systems biology 8 (1), 1-8, 2014 | 8 | 2014 |
| A novel point mutation (L70P) inactivates poliovirus 3C protease. M Uma, SR Hegde, PP Rao, K Nagalekshmi, S Gauthami, D Kumar, ... Acta virologica 62 (1), 68-77, 2018 | 4 | 2018 |
| Delineation of key regulatory elements identifies points of vulnerability in the mitogen-activated signaling network N Jailkhani, S Ravichandran, SR Hegde, Z Siddiqui, SC Mande, KVS Rao Genome research 21 (12), 2067-2081, 2011 | 4 | 2011 |
| Identification of self-consistent modulons from bacterial microarray expression data with the help of structured regulon gene sets EA Permina, YA Medvedeva, PM Baeck, SR Hegde, SC Mande, ... Journal of Biomolecular Structure and Dynamics 31 (1), 115-124, 2013 | 2 | 2013 |
| Tumor relevant protein functional interactions identified using bipartite graph analyses DL Venkatraman, D Pulimamidi, HG Shukla, SR Hegde Scientific reports 11 (1), 1-11, 2021 | 1 | 2021 |
| Integrating multi-omics data to investigate pseudogene expression in Mycolicibacterium smegmatis R Balasubramanian, SR Hegde Gene 755, 144908, 2020 | | 2020 |
| Prediction of Genome-wide Interactions reveals Communication Signals during Mycobacterial Latency S Hegde, C Das, S Mande Department of Bioengineering and Bioinformatics of MV Lomonosov Moscow State …, 2011 | | 2011 |
| Study of DNA Binding Proteins in E. coli and their role in organization of nucleoid structure P Ghosh, D Basu, SR Hegde, SC Mande Department of Bioengineering and Bioinformatics of MV Lomonosov Moscow State …, 2011 | | 2011 |
| ‘Protein Interaction Network Weighted with Co-expression’Approach to Deciphering Proteasomal Chaperone Functions in Cancer R Sundararajan, S Hegde, A Jha, B Soni, N Sangith, P Venkatraman | | |
