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Harun Mustafa
Harun Mustafa
Email verificata su inf.ethz.ch
Titolo
Citata da
Citata da
Anno
A global metagenomic map of urban microbiomes and antimicrobial resistance
D Danko, D Bezdan, EE Afshin, S Ahsanuddin, C Bhattacharya, DJ Butler, ...
Cell 184 (13), 3376-3393. e17, 2021
90*2021
Communication-efficient jaccard similarity for high-performance distributed genome comparisons
M Besta, R Kanakagiri, H Mustafa, M Karasikov, G Rätsch, T Hoefler, ...
2020 IEEE International Parallel and Distributed Processing Symposium (IPDPS …, 2020
302020
Dynamic compression schemes for graph coloring
H Mustafa, I Schilken, M Karasikov, C Eickhoff, G Rätsch, A Kahles
Bioinformatics 35 (3), 407-414, 2019
28*2019
Detecting Alu insertions from high-throughput sequencing data
M David, H Mustafa, M Brudno
Nucleic acids research 41 (17), e169-e169, 2013
212013
Metagraph: Indexing and analysing nucleotide archives at petabase-scale
M Karasikov, H Mustafa, D Danciu, M Zimmermann, C Barber, G Rätsch, ...
bioRxiv, 2020
17*2020
Sparse binary relation representations for genome graph annotation
M Karasikov, H Mustafa, A Joudaki, S Javadzadeh-No, G Rätsch, ...
International Conference on Research in Computational Molecular Biology, 120-135, 2019
132019
GenStore: a high-performance in-storage processing system for genome sequence analysis
N Mansouri Ghiasi, J Park, H Mustafa, J Kim, A Olgun, A Gollwitzer, ...
Proceedings of the 27th ACM International Conference on Architectural …, 2022
12*2022
AStarix: Fast and Optimal Sequence-to-Graph Alignment
P Ivanov, B Bichsel, H Mustafa, A Kahles, G Rätsch, M Vechev
International Conference on Research in Computational Molecular Biology, 104-119, 2020
112020
Sequence-based prediction of permissive stretches for internal protein tagging and knockdown
S Oesterle, TM Roberts, LA Widmer, H Mustafa, S Panke, S Billerbeck
BMC biology 15 (1), 1-17, 2017
102017
META: Memory-efficient taxonomic classification and abundance estimation for metagenomics with deep learning
A Georgiou, V Fortuin, H Mustafa, G Rätsch
arXiv preprint arXiv:1909.13146, 2019
5*2019
Assembly and characterization of novel Alu inserts detected from next-generation sequencing data
H Mustafa, M David, M Brudno
Mobile genetic elements 4 (5), 1-7, 2014
32014
Lossless indexing with counting de bruijn graphs
M Karasikov, H Mustafa, G Rätsch, A Kahles
International Conference on Research in Computational Molecular Biology, 374-376, 2022
22022
Topology-based sparsification of graph annotations
D Danciu, M Karasikov, H Mustafa, A Kahles, G Rätsch
Bioinformatics 37 (Supplement_1), i169-i176, 2021
12021
Biosynthetic potential of the global ocean microbiome
L Paoli, HJ Ruscheweyh, CC Forneris, F Hubrich, S Kautsar, A Bhushan, ...
Nature, 1-8, 2022
2022
Model Decarboxylated Schiff base of Asparagine as a Precursor in Carcinogenic Acrylamide Formation
FY Gao, A Dodin, H Mustafa, NJ Galant, IG Csizmadia
Journal of Undergraduate Life Sciences• Volume 7 (1), 2013
2013
Selenium glycoside as a delivery vehicle for selenium supplements
H Mustafa, S Vukovic, IG Csizmadia
University of Toronto Journal of Undergraduate Life Sciences 5 (1), 2011
2011
Il sistema al momento non può eseguire l'operazione. Riprova più tardi.
Articoli 1–16