Česlovas Venclovas

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Kliment OlechnovicLife Sciences Center, Institute of Biotechnology, Vilnius UniversityVerified email at ibt.lt
Darius KazlauskasSenior Researcher at Institute of Biotechnology, Life Sciences Center, Vilnius UniversityVerified email at ibt.lt
Michael P ThelenRetired Scientist, Lawrence Livermore National Laboratory & The Joint BioEnergy InstituteVerified email at llnl.gov
Albertas TiminskasVilnius University, Institute of BiotechnologyVerified email at bti.vu.lt
Andriy KryshtafovychUniversity of California, DavisVerified email at ucdavis.edu
Justas DapkūnasInstitute of Biotechnology, Life Sciences Center, Vilnius UniversityVerified email at bti.vu.lt
Valerie MizrahiUniversity of Cape TownVerified email at uct.ac.za
Philippe HORVATHSenior scientist, DuPont Nutrition and HealthVerified email at dupont.com
Visvaldas KairysVilnius UniversityVerified email at bti.vu.lt
Mart KrupovicHead of the Archaeal Virology Unit, Institut PasteurVerified email at pasteur.fr
Burkhard RostProfessor of Computer Science & Computational Biology & Bioinformatics, TUM, MunichVerified email at tum.de
Digby WarnerProfessor, University of Cape TownVerified email at uct.ac.za
Saulius KlimašauskasInstitute of Biotechnology, Life Sciences Center, Vilnius UniversityVerified email at ibt.lt
Penny BeuningNortheastern UniversityVerified email at neu.edu
Daniel BarskyPhysics Department, California State University East BayVerified email at csueastbay.edu
Maris LaanUniversity of Tartu, Institute of Biomedicine and Translational MedicineVerified email at ut.ee
Lajos HaracskaLeader of the Mutagenesis and Carcinogenesis research group, Biological Research Centre of TheVerified email at brc.hu
Mark C. WilliamsProfessor and Chair of Physics, Northeastern UniversityVerified email at neu.edu
Daumantas MatulisHead of Department of Biothermodynamics and Drug Design, Vilnius University Institute ofVerified email at bti.vu.lt
Anna TramontanoSapienza University - Department of PhysicsVerified email at uniroma1.it

Česlovas Venclovas

Institute of Biotechnology, Life Sciences Center, Vilnius University

Verified email at bti.vu.lt - Homepage

Computational structural biology Bioinformatics Protein structure prediction DNA replication and repair CRISPR-Cas


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Evolutionary classification of CRISPR–Cas systems: a burst of class 2 and derived variants KS Makarova, YI Wolf, J Iranzo, SA Shmakov, OS Alkhnbashi, SJJ Brouns, ... Nature Reviews Microbiology 18 (2), 67-83, 2020	818	2020
A modified definition of Sov, a segment‐based measure for protein secondary structure prediction assessment A Zemla, Č Venclovas, K Fidelis, B Rost Proteins: Structure, Function, and Bioinformatics 34 (2), 220-223, 1999	453	1999
Structure-based predictions of Rad1, Rad9, Hus1 and Rad17 participation in sliding clamp and clamp-loading complexes C Venclovas, MP Thelen Nucleic acids research 28 (13), 2481-2493, 2000	340	2000
Processing and analysis of CASP3 protein structure predictions A Zemla, Č Venclovas, J Moult, K Fidelis Proteins: Structure, Function, and Bioinformatics 37 (S3), 22-29, 1999	330	1999
A cyclic oligonucleotide signaling pathway in type III CRISPR-Cas systems M Kazlauskiene, G Kostiuk, Č Venclovas, G Tamulaitis, V Siksnys Science 357 (6351), 605-609, 2017	285	2017
Programmable RNA shredding by the type III-A CRISPR-Cas system of Streptococcus thermophilus G Tamulaitis, M Kazlauskiene, E Manakova, Č Venclovas, AO Nwokeoji, ... Molecular cell 56 (4), 506-517, 2014	261	2014
Progress over the first decade of CASP experiments A Kryshtafovych, Č Venclovas, K Fidelis, J Moult Proteins: Structure, Function, and Bioinformatics 61 (S7), 225-236, 2005	223	2005
Spatiotemporal control of type III-A CRISPR-Cas immunity: coupling DNA degradation with the target RNA recognition M Kazlauskiene, G Tamulaitis, G Kostiuk, Č Venclovas, V Siksnys Molecular cell 62 (2), 295-306, 2016	192	2016
A sliding clamp model for the Rad1 family of cell cycle checkpoint proteins MP Thelen, Č Venclovas, K Fidelis Cell 96 (6), 769-770, 1999	189	1999
Processing and evaluation of predictions in CASP4 A Zemla, Č Venclovas, J Moult, K Fidelis Proteins: Structure, Function, and Bioinformatics 45 (S5), 13-21, 2001	167	2001
Assessment of progress over the CASP experiments C Venclovas, A Zemla, K Fidelis, J Moult Proteins: Structure, Function, and Bioinformatics 53 (S6), 585-595, 2003	154	2003
CAD‐score: a new contact area difference‐based function for evaluation of protein structural models K Olechnovič, E Kulberkytė, Č Venclovas Proteins: Structure, Function, and Bioinformatics 81 (1), 149-162, 2013	112	2013
Type III CRISPR-Cas immunity: major differences brushed aside G Tamulaitis, Č Venclovas, V Siksnys Trends in microbiology 25 (1), 49-61, 2017	110	2017
Essential roles for imuA′-and imuB-encoded accessory factors in DnaE2-dependent mutagenesis in Mycobacterium tuberculosis DF Warner, DE Ndwandwe, GL Abrahams, BD Kana, EE Machowski, ... Proceedings of the National Academy of Sciences 107 (29), 13093-13098, 2010	110	2010
Comparative modeling in CASP6 using consensus approach to template selection, sequence‐structure alignment, and structure assessment Č Venclovas, M Margelevičius Proteins: Structure, Function, and Bioinformatics 61 (S7), 99-105, 2005	106	2005
VoroMQA: Assessment of protein structure quality using interatomic contact areas K Olechnovič, Č Venclovas Proteins: Structure, Function, and Bioinformatics 85 (6), 1131-1145, 2017	105	2017
Physical and functional interactions between MutY glycosylase homologue (MYH) and checkpoint proteins Rad9–Rad1–Hus1 G Shi, DY Chang, CC Cheng, X Guan, Č Venclovas, AL Lu Biochemical Journal 400 (Pt 1), 53, 2006	102	2006
PAM recognition by miniature CRISPR–Cas12f nucleases triggers programmable double-stranded DNA target cleavage T Karvelis, G Bigelyte, JK Young, Z Hou, R Zedaveinyte, K Budre, ... Nucleic acids research 48 (9), 5016-5023, 2020	90	2020
Comparison of performance in successive CASP experiments Č Venclovas, A Zemla, K Fidelis, J Moult Proteins: Structure, Function, and Bioinformatics 45 (S5), 163-170, 2001	89	2001
Five‐stranded β‐sheet sandwiched with two α‐helices: A structural link between restriction endonucleases EcoRI and EcoRV Č Venclovas, A Timinskas, V Siksnys Proteins: Structure, Function, and Bioinformatics 20 (3), 279-282, 1994	85	1994

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