Daniela Besozzi
TitleCited byYear
Dynamical probabilistic P systems
D Pescini, D Besozzi, G Mauri, C Zandron
International Journal of Foundations of Computer Science 17 (01), 183-204, 2006
1152006
Dynamical probabilistic P systems
D Pescini, D Besozzi, G Mauri, C Zandron
International Journal of Foundations of Computer Science 17 (01), 183-204, 2006
1152006
Modelling metapopulations with stochastic membrane systems
D Besozzi, P Cazzaniga, D Pescini, G Mauri
Biosystems 91 (3), 499-514, 2008
662008
Graphics processing units in bioinformatics, computational biology and systems biology
MS Nobile, P Cazzaniga, A Tangherloni, D Besozzi
Briefings in bioinformatics 18 (5), 870-885, 2016
572016
A GPU-based multi-swarm PSO method for parameter estimation in stochastic biological systems exploiting discrete-time target series
MS Nobile, D Besozzi, P Cazzaniga, G Mauri, D Pescini
European Conference on Evolutionary Computation, Machine Learning and Data …, 2012
502012
Modeling and stochastic simulation of the Ras/cAMP/PKA pathway in the yeast Saccharomyces cerevisiae evidences a key regulatory function for intracellular guanine nucleotides pools
P Cazzaniga, D Pescini, D Besozzi, G Mauri, S Colombo, E Martegani
Journal of biotechnology 133 (3), 377-385, 2008
502008
Tau leaping stochastic simulation method in p systems
P Cazzaniga, D Pescini, D Besozzi, G Mauri
International Workshop on Membrane Computing, 298-313, 2006
502006
AP system description of the sodium-potassium pump
D Besozzi, G Ciobanu
International Workshop on Membrane Computing, 210-223, 2004
472004
Fuzzy Self-Tuning PSO: A settings-free algorithm for global optimization
MS Nobile, P Cazzaniga, D Besozzi, R Colombo, G Mauri, G Pasi
Swarm and evolutionary computation 39, 70-85, 2018
442018
A comparison of genetic algorithms and particle swarm optimization for parameter estimation in stochastic biochemical systems
D Besozzi, P Cazzaniga, G Mauri, D Pescini, L Vanneschi
European Conference on Evolutionary Computation, Machine Learning and Data …, 2009
402009
GPU-accelerated simulations of mass-action kinetics models with cupSODA
MS Nobile, P Cazzaniga, D Besozzi, G Mauri
The Journal of Supercomputing 69 (1), 17-24, 2014
392014
Computational strategies for a system-level understanding of metabolism
P Cazzaniga, C Damiani, D Besozzi, R Colombo, MS Nobile, D Gaglio, ...
Metabolites 4 (4), 1034-1087, 2014
382014
The role of feedback control mechanisms on the establishment of oscillatory regimes in the Ras/cAMP/PKA pathway in S. cerevisiae
D Besozzi, P Cazzaniga, D Pescini, G Mauri, S Colombo, E Martegani
EURASIP Journal on Bioinformatics and Systems Biology 2012 (1), 10, 2012
322012
cuTauLeaping: A GPU-powered tau-leaping stochastic simulator for massive parallel analyses of biological systems
MS Nobile, P Cazzaniga, D Besozzi, D Pescini, G Mauri
PLoS One 9 (3), e91963, 2014
302014
Computational and modelling power of P systems
D Besozzi
University of Milan, 2004
292004
Simulation of the Ras/cAMP/PKA pathway in budding yeast highlights the establishment of stable oscillatory states
D Pescini, P Cazzaniga, D Besozzi, G Mauri, L Amigoni, S Colombo, ...
Biotechnology advances 30 (1), 99-107, 2012
262012
Analysis and simulation of dynamics in probabilistic P systems
D Pescini, D Besozzi, C Zandron, G Mauri
International Workshop on DNA-Based Computers, 236-247, 2005
262005
An excursion in reaction systems: From computer science to biology
L Corolli, C Maj, F Marini, D Besozzi, G Mauri
Theoretical computer science 454, 95-108, 2012
252012
The impact of particles initialization in PSO: parameter estimation as a case in point
P Cazzaniga, MS Nobile, D Besozzi
2015 IEEE Conference on Computational Intelligence in Bioinformatics and …, 2015
232015
Proactive particles in swarm optimization: a self-tuning algorithm based on fuzzy logic
MS Nobile, G Pasi, P Cazzaniga, D Besozzi, R Colombo, G Mauri
2015 IEEE International Conference on Fuzzy Systems (FUZZ-IEEE), 1-8, 2015
232015
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Articles 1–20