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Daniela Besozzi
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USE-Net: Incorporating Squeeze-and-Excitation blocks into U-Net for prostate zonal segmentation of multi-institutional MRI datasets
L Rundo, C Han, Y Nagano, J Zhang, R Hataya, C Militello, A Tangherloni, ...
Neurocomputing 365, 31-43, 2019
1962019
Fuzzy Self-Tuning PSO: A settings-free algorithm for global optimization
MS Nobile, P Cazzaniga, D Besozzi, R Colombo, G Mauri, G Pasi
Swarm and evolutionary computation 39, 70-85, 2018
1882018
Graphics processing units in bioinformatics, computational biology and systems biology
MS Nobile, P Cazzaniga, A Tangherloni, D Besozzi
Briefings in bioinformatics 18 (5), 870-885, 2017
1482017
Dynamical probabilistic P systems
D Pescini, D Besozzi, G Mauri, C Zandron
International Journal of Foundations of Computer Science 17 (01), 183-204, 2006
1242006
MedGA: a novel evolutionary method for image enhancement in medical imaging systems
L Rundo, A Tangherloni, MS Nobile, C Militello, D Besozzi, G Mauri, ...
Expert Systems with Applications 119, 387-399, 2019
1012019
Modelling metapopulations with stochastic membrane systems
D Besozzi, P Cazzaniga, D Pescini, G Mauri
Biosystems 91 (3), 499-514, 2008
722008
A GPU-based multi-swarm PSO method for parameter estimation in stochastic biological systems exploiting discrete-time target series
MS Nobile, D Besozzi, P Cazzaniga, G Mauri, D Pescini
Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics …, 2012
592012
Modeling and stochastic simulation of the Ras/cAMP/PKA pathway in the yeast Saccharomyces cerevisiae evidences a key regulatory function for intracellular guanine nucleotides pools
P Cazzaniga, D Pescini, D Besozzi, G Mauri, S Colombo, E Martegani
Journal of biotechnology 133 (3), 377-385, 2008
572008
Computational strategies for a system-level understanding of metabolism
P Cazzaniga, C Damiani, D Besozzi, R Colombo, MS Nobile, D Gaglio, ...
Metabolites 4 (4), 1034-1087, 2014
562014
Tau leaping stochastic simulation method in P systems
P Cazzaniga, D Pescini, D Besozzi, G Mauri
Membrane Computing: 7th International Workshop, WMC 2006, Leiden, The …, 2006
552006
AP system description of the sodium-potassium pump
D Besozzi, G Ciobanu
Membrane Computing: 5th International Workshop, WMC 2004, Milan, Italy, June …, 2005
532005
GPU-accelerated simulations of mass-action kinetics models with cupSODA
MS Nobile, P Cazzaniga, D Besozzi, G Mauri
The Journal of Supercomputing 69, 17-24, 2014
522014
The impact of particles initialization in PSO: parameter estimation as a case in point
P Cazzaniga, MS Nobile, D Besozzi
2015 IEEE Conference on Computational Intelligence in Bioinformatics and …, 2015
512015
An excursion in reaction systems: From computer science to biology
L Corolli, C Maj, F Marini, D Besozzi, G Mauri
Theoretical computer science 454, 95-108, 2012
482012
Biochemical parameter estimation vs. benchmark functions: A comparative study of optimization performance and representation design
A Tangherloni, S Spolaor, P Cazzaniga, D Besozzi, L Rundo, G Mauri, ...
Applied Soft Computing 81, 105494, 2019
472019
cuTauLeaping: A GPU-powered tau-leaping stochastic simulator for massive parallel analyses of biological systems
MS Nobile, P Cazzaniga, D Besozzi, D Pescini, G Mauri
PLoS One 9 (3), e91963, 2014
472014
A novel framework for MR image segmentation and quantification by using MedGA
L Rundo, A Tangherloni, P Cazzaniga, MS Nobile, G Russo, MC Gilardi, ...
Computer methods and programs in biomedicine 176, 159-172, 2019
462019
A comparison of genetic algorithms and particle swarm optimization for parameter estimation in stochastic biochemical systems
D Besozzi, P Cazzaniga, G Mauri, D Pescini, L Vanneschi
Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics …, 2009
462009
Computational intelligence for parameter estimation of biochemical systems
MS Nobile, A Tangherloni, L Rundo, S Spolaor, D Besozzi, G Mauri, ...
2018 IEEE congress on evolutionary computation (CEC), 1-8, 2018
442018
The role of feedback control mechanisms on the establishment of oscillatory regimes in the Ras/cAMP/PKA pathway in S. cerevisiae
D Besozzi, P Cazzaniga, D Pescini, G Mauri, S Colombo, E Martegani
EURASIP Journal on Bioinformatics and Systems Biology 2012 (1), 1-17, 2012
432012
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