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Lukas F Milles
Lukas F Milles
University of Washington - Institute for Protein Design
Verified email at uw.edu
Title
Cited by
Cited by
Year
Robust deep learning–based protein sequence design using ProteinMPNN
J Dauparas, I Anishchenko, N Bennett, H Bai, RJ Ragotte, LF Milles, ...
Science 378 (6615), 49-56, 2022
5092022
De novo design of protein structure and function with RFdiffusion
JL Watson, D Juergens, NR Bennett, BL Trippe, J Yim, HE Eisenach, ...
Nature 620 (7976), 1089-1100, 2023
2902023
Scaffolding protein functional sites using deep learning
J Wang, S Lisanza, D Juergens, D Tischer, JL Watson, KM Castro, ...
Science 377 (6604), 387-394, 2022
2332022
Molecular mechanism of extreme mechanostability in a pathogen adhesin
LF Milles, K Schulten, HE Gaub, RC Bernardi
Science 359 (6383), 1527-1533, 2018
1952018
Broadly applicable and accurate protein design by integrating structure prediction networks and diffusion generative models
JL Watson, D Juergens, NR Bennett, BL Trippe, J Yim, HE Eisenach, ...
BioRxiv, 2022.12. 09.519842, 2022
1572022
Hallucinating symmetric protein assemblies
BIM Wicky, LF Milles, A Courbet, RJ Ragotte, J Dauparas, E Kinfu, S Tipps, ...
Science 378 (6615), 56-61, 2022
1172022
Ultrastable cellulosome-adhesion complex tightens under load
C Schoeler, KH Malinowska, RC Bernardi, LF Milles, MA Jobst, E Durner, ...
Nature communications 5 (1), 5635, 2014
1062014
Structural and mechanistic insights into mechanoactivation of focal adhesion kinase
MS Bauer, F Baumann, C Daday, P Redondo, E Durner, MA Jobst, ...
Proceedings of the National Academy of Sciences 116 (14), 6766-6774, 2019
1052019
From genes to protein mechanics on a chip
M Otten, W Ott, MA Jobst, LF Milles, T Verdorfer, DA Pippig, MA Nash, ...
Nature methods 11 (11), 1127-1130, 2014
782014
Elastin-like polypeptide linkers for single-molecule force spectroscopy
W Ott, MA Jobst, MS Bauer, E Durner, LF Milles, MA Nash, HE Gaub
ACS nano 11 (6), 6346-6354, 2017
712017
Calcium stabilizes the strongest protein fold
LF Milles, EM Unterauer, T Nicolaus, HE Gaub
Nature communications 9 (1), 4764, 2018
502018
Language models generalize beyond natural proteins
R Verkuil, O Kabeli, Y Du, BIM Wicky, LF Milles, J Dauparas, D Baker, ...
bioRxiv, 2022.12. 21.521521, 2022
472022
Resolving dual binding conformations of cellulosome cohesin-dockerin complexes using single-molecule force spectroscopy
MA Jobst, LF Milles, C Schoeler, W Ott, DB Fried, EA Bayer, HE Gaub, ...
Elife 4, e10319, 2015
472015
Monovalent Strep-Tactin for strong and site-specific tethering in nanospectroscopy
F Baumann, MS Bauer, LF Milles, A Alexandrovich, HE Gaub, DA Pippig
Nature Nanotechnology 11 (1), 89-94, 2016
442016
Monodisperse measurement of the biotin-streptavidin interaction strength in a well-defined pulling geometry
SM Sedlak, MS Bauer, C Kluger, LC Schendel, LF Milles, DA Pippig, ...
PLoS One 12 (12), e0188722, 2017
432017
Design of proteins presenting discontinuous functional sites using deep learning
D Tischer, S Lisanza, J Wang, R Dong, I Anishchenko, LF Milles, ...
Biorxiv, 2020.11. 29.402743, 2020
412020
A tethered ligand assay to probe SARS-CoV-2: ACE2 interactions
MS Bauer, S Gruber, A Hausch, PSFC Gomes, LF Milles, T Nicolaus, ...
Proceedings of the National Academy of Sciences 119 (14), e2114397119, 2022
372022
Deep learning methods for designing proteins scaffolding functional sites
J Wang, S Lisanza, D Juergens, D Tischer, I Anishchenko, M Baek, ...
BioRxiv, 2021.11. 10.468128, 2021
342021
Different vinculin binding sites use the same mechanism to regulate directional force transduction
C Kluger, L Braun, SM Sedlak, DA Pippig, MS Bauer, K Miller, LF Milles, ...
Biophysical journal 118 (6), 1344-1356, 2020
332020
Extreme mechanical stability in protein complexes
LF Milles, HE Gaub
Current Opinion in Structural Biology 60, 124-130, 2020
302020
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